Factsheet for Zm00001d013390_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 20408568
extracellular: 22192489
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93548	Sorghum	vacuole	90.5	89.89
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	80.32	79.24
HORVU4Hr1G008950.1	Barley	vacuole	69.0	73.14
TraesCS4B01G053700.2	Wheat	vacuole	68.78	72.73
TraesCS4D01G053700.1	Wheat	vacuole	69.23	72.34
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	68.33	72.25
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	52.94	50.98
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	49.77	47.93
PGSC0003DMT400013154	Potato	extracellular, vacuole	47.74	47.85
Solyc04g080260.2.1	Tomato	extracellular	47.51	47.62
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	48.87	47.06
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	48.64	46.44
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	45.93	46.35
Bra033641.1-P	Field mustard	extracellular, vacuole	45.25	46.3
CDY22386	Canola	extracellular, vacuole	45.02	46.06
KRH24481	Soybean	cytosol	37.33	45.83
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	48.19	45.81
PGSC0003DMT400001908	Potato	extracellular	48.64	45.74
Solyc01g109570.2.1	Tomato	extracellular	48.64	45.45
CDX71547	Canola	extracellular, vacuole	44.57	45.18
KRH15221	Soybean	extracellular	48.42	44.21
Zm00001d028331_P001	Maize	plastid	51.81	44.04
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	48.42	43.67
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	46.83	41.07
Bra039852.1-P	Field mustard	vacuole	43.21	40.99
CDX75437	Canola	extracellular, plasma membrane, vacuole	45.7	39.92
CDX69064	Canola	extracellular, plasma membrane, vacuole	45.48	39.8
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.48	39.72
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	35.29	39.49
AT2G16230.1	Thale cress	vacuole	43.44	38.17
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	35.07	38.08
Zm00001d036051_P001	Maize	extracellular, vacuole	36.2	37.56
Bra017659.1-P	Field mustard	vacuole	47.06	37.55
CDY37244	Canola	vacuole	43.21	37.3
Zm00001d010137_P001	Maize	extracellular	33.94	37.04
CDY26761	Canola	vacuole	42.76	36.91
Zm00001d000117_P001	Maize	plastid, vacuole	32.81	36.52
Zm00001d028410_P001	Maize	vacuole	29.41	36.01
Zm00001d042767_P001	Maize	plasma membrane	33.48	35.75
Zm00001d030361_P001	Maize	plasma membrane	32.58	35.64
Zm00001d012292_P001	Maize	mitochondrion	33.48	34.74
Zm00001d046534_P001	Maize	plasma membrane	30.77	34.52
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	32.58	34.45
Zm00001d004768_P001	Maize	extracellular	33.48	32.6
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	31.9	31.33
Zm00001d031571_P001	Maize	extracellular	33.94	31.12
Zm00001d019248_P001	Maize	extracellular, vacuole	34.62	30.72
Zm00001d018214_P001	Maize	extracellular	32.35	29.3
Zm00001d021024_P001	Maize	extracellular	30.77	28.39
Zm00001d004763_P001	Maize	extracellular	30.09	28.18
Zm00001d028243_P001	Maize	plasma membrane	30.77	27.09
Zm00001d043524_P001	Maize	plasma membrane	30.09	26.81
Zm00001d048055_P001	Maize	plasma membrane	30.09	26.55
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	26.02	23.0
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	25.57	22.97
Zm00001d021690_P001	Maize	extracellular	29.41	22.26
Zm00001d006538_P001	Maize	vacuole	31.45	21.42
Zm00001d021598_P005	Maize	plasma membrane	30.32	20.36
Zm00001d021695_P001	Maize	extracellular	29.41	20.09
Zm00001d021697_P001	Maize	extracellular	31.22	19.86

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1D6GIR2	ProteinID:AQK63315.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF107	SUPFAM:SSF51445
SignalP:SignalP-noTM	UniParc:UPI0002213B7E	EnsemblPlantsGene:Zm00001d013390	EnsemblPlants:Zm00001d013390_P001	EnsemblPlants:Zm00001d013390_T001	SEG:seg

Description

Glucan endo-1%2C3-beta-glucosidase 7

Coordinates

chr5:-:10261470..10264213

Molecular Weight (calculated)

45331.8 Da

IEP (calculated)

5.377

GRAVY (calculated)

0.109

Length

442 amino acids

Sequence
(BLAST)

001: MTGRRELLLL ALLGVLQLAL RLPSAASQSF IGINYGEVAD NLPPPSSTAR LVQSTTITKV RLYGTDPAII SAFSGTGVSL LLGATNGDIA NLASSPAAAA
101: AWVAAHLPAS SPAVSTVSVG NEVLFADASL ASQLVPAMQN LHDALPPNSS VKVSTVNAMD VLASSDPPSS GAFKPELAAA LDPLLAFLSK TGSPFLINPY
201: PYFAYLSDPR PETLAFCLFQ PNAGRPDAGS SLTYTNMFDA QVDAVRAALD AKGYKDVDIV VAETGWPHKG DPDEAGATVE NARAFVSGLV SHLRSLSGTP
301: RAPGKSVETY IFAMYDEDLK PGKASERYFG LFQTSLAETY PTGLLRNGTA GPIPATAPAP APTTSAATLK PTPGQQTQVT PAQQGSTAAA GPSGICRPGP
401: GTATSRGTTT ACAQPSAAES SRASSMLPII AGFPVIALLM FT

Best Arabidopsis Sequence Match ( AT5G42720.1 )
(BLAST)

001: MRASVYSLIL LFFSCLLHLS KSQPFLGVNY GLTADNLPPP SASAKLLQST TFQKVRLYGS DPAVIKALAN TGIEIVIGAS NGDVPGLASD PSFARSWVET
101: NVVPYYPASK IVLIAVGNEI TSFGDNSLMS QLLPAMKNVQ TALEAASLGG GKIKVSTVHI MSVLAGSDPP STAVFKPEHA DILKGLLEFN SETGSPFAVN
201: PYPFFAYQDD RRPETLAYCL FQANPGRVDP NSNLKYMNMF DAQVDAVYSA LNSMGFKDVE IMVAETGWPY KGDPEEAGAT VENARAYNKN LIAHLKSGSG
301: TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NYNQTSMAPL SPTRPRLPPA AAPTRQTLPS PPQMILPSPV TPSDKNSGQT
401: DVHNSTPRSA SLAHICRSLS ISASMFFVSV LYALIILL

Arabidopsis Description

Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q8VY12]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.