Factsheet for VIT_18s0001g12390.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	77.42	73.47
KRH15221	Soybean	extracellular	71.83	69.01
PGSC0003DMT400013154	Potato	extracellular, vacuole	65.38	68.93
Solyc04g080260.2.1	Tomato	extracellular	65.16	68.71
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	60.86	61.66
Bra033641.1-P	Field mustard	extracellular, vacuole	57.2	61.57
GSMUA_Achr7P08120_001	Banana	plastid	42.58	61.49
CDY22386	Canola	extracellular, vacuole	56.99	61.34
CDX71547	Canola	extracellular, vacuole	56.34	60.09
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	55.7	59.13
Os03t0669300-02	Rice	endoplasmic reticulum	57.63	57.76
TraesCS4B01G020100.1	Wheat	extracellular	56.56	56.8
GSMUA_Achr7P26810_001	Banana	plastid	35.91	56.42
TraesCS4A01G293500.1	Wheat	plasma membrane	56.56	56.2
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	56.56	55.84
Os03t0227400-01	Rice	plasma membrane	43.66	55.62
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	56.56	55.37
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	54.62	54.86
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	44.95	50.0
TraesCS4A01G077800.1	Wheat	vacuole	46.45	49.66
HORVU4Hr1G008950.1	Barley	vacuole	44.52	49.64
TraesCS4B01G053700.2	Wheat	vacuole	44.52	49.52
HORVU4Hr1G065340.1	Barley	extracellular, vacuole	45.81	49.42
TraesCS4D01G053700.1	Wheat	vacuole	44.95	49.41
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	46.45	49.32
EER95211	Sorghum	extracellular, vacuole	45.81	49.31
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	48.17	49.02
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	56.34	48.88
EER93548	Sorghum	vacuole	46.67	48.76
Zm00001d013390_P001	Maize	extracellular	45.81	48.19
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	45.38	47.1
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	44.3	46.09
VIT_16s0098g01560.t01	Wine grape	extracellular	45.59	45.99
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	44.95	45.34
VIT_10s0003g03690.t01	Wine grape	extracellular	35.05	43.47
VIT_06s0004g04750.t01	Wine grape	extracellular	32.69	42.22
VIT_18s0122g00980.t01	Wine grape	extracellular	40.65	41.09
Zm00001d028331_P001	Maize	plastid	45.81	40.96
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	35.27	40.0
VIT_02s0025g02770.t01	Wine grape	extracellular	33.55	38.52
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	38.71	38.22
VIT_09s0002g06880.t01	Wine grape	vacuole	32.69	38.1
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	38.06	37.58
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	38.06	35.83
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	30.32	35.79
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	36.34	33.94
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	33.33	33.19
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	33.55	32.98
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	34.41	32.39
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	33.76	27.69

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100257468	wikigene:100257468	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CBI19687
ProteinID:CBI19687.3	UniProt:E0CQB9	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100257468	wikigene:LOC100257468	PFAM:PF00332	PFAM:PF07983
PANTHER:PTHR32227	PANTHER:PTHR32227:SF228	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	TIGR:TC62849
TIGR:TC66187	UniParc:UPI00019852FA	ArrayExpress:VIT_18s0001g12390	EnsemblPlantsGene:VIT_18s0001g12390	EnsemblPlants:VIT_18s0001g12390.t01	unigene:Vvi.3404
InterPro:X8	RefSeq:XP_002282736	RefSeq:XP_002282736.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:-:10590637..10594951

Molecular Weight (calculated)

49676.0 Da

IEP (calculated)

7.355

GRAVY (calculated)

-0.132

Length

465 amino acids

Sequence
(BLAST)

001: MTTFRCASVA FLFSLLHSVL LARSESFIGI NYGQVADNLP PPSATAKLLQ STSIEKVRLY GADPAIIKAL ANTGIGIVIG TANGDVPALA SDPNFARNWI
101: NSNVLPYYPS SKIILITVGN EVMTSGDQNL MTQLLPAMQN LQNALNGASL GGMIKVSTVH SMAVLKQSEP PSSGSFDPSF GDLMKGLLGF NKATGSPFAI
201: NPYPYFAYRS DHRPETLAFC LFQPNSGRFD SGTNIKYMNM FDAQVDAVRA ALNSMGFKEI EIVVAETGWP YKGDSNEVGP SIENAKAYNG NLISHLRSLV
301: GTPLMPGKSV DTYLFALYDE DLKPGPGSER AFGLFKTDLT MTYDVGLSKG AQNTTPAPAT PKTPATPSPS PSTNGTWCVP KSVVSNAQLQ ANLDYACGQG
401: IDCRPVQPGG ACFEPNTVAS HAAYAMNLFY QNSARNPWNC DFSQTATLTS KNPSYKGCIY PGGRT

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.