Factsheet for VIT_10s0116g01640.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	70.72	76.53
AT1G11820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	68.43	75.93
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	54.5	74.82
KRH51109	Soybean	vacuole	67.55	73.23
Bra016812.1-P	Field mustard	extracellular	65.43	71.48
CDY21013	Canola	extracellular	65.43	71.48
KRH11452	Soybean	extracellular, vacuole	42.33	71.43
GSMUA_Achr4P27760_001	Banana	cytosol, extracellular, vacuole	30.86	71.14
CDY31214	Canola	vacuole	65.08	70.69
KRH02051	Soybean	mitochondrion, vacuole	66.84	69.41
GSMUA_Achr2P13900_001	Banana	cytosol	53.97	61.57
GSMUA_Achr4P33420_001	Banana	vacuole	53.26	58.87
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	49.74	56.63
Os07t0510200-01	Rice	plasma membrane	53.62	56.3
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	51.85	55.26
TraesCS2B01G274900.1	Wheat	plasma membrane	51.5	54.89
TraesCS2D01G230900.1	Wheat	plasma membrane	51.5	54.89
KXG36295	Sorghum	plasma membrane	51.85	54.34
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	47.09	54.05
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	40.39	48.41
Zm00001d021598_P005	Maize	plasma membrane	50.97	43.92
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	31.92	38.43
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	31.04	37.37
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	32.1	36.84
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	28.75	36.47
VIT_06s0004g04750.t01	Wine grape	extracellular	22.75	35.83
VIT_16s0098g01560.t01	Wine grape	extracellular	29.1	35.79
VIT_18s0122g00980.t01	Wine grape	extracellular	28.04	34.57
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	27.87	33.83
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	27.69	33.76
VIT_10s0003g03690.t01	Wine grape	extracellular	22.05	33.33
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	23.99	33.17
VIT_02s0025g02770.t01	Wine grape	extracellular	23.28	32.59
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	22.4	32.23
VIT_09s0002g06880.t01	Wine grape	vacuole	22.57	32.08
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	27.69	32.04
HORVU2Hr1G047410.3	Barley	vacuole	29.81	28.03

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100250285	wikigene:100250285	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CCB48208
ProteinID:CCB48208.1	UniProt:F6H7K8	EMBL:FN595248	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100250285	wikigene:LOC100250285	PFAM:PF00332
PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF120	SMART:SM00768	SUPFAM:SSF51445
SignalP:SignalP-noTM	UniParc:UPI0002108D22	ArrayExpress:VIT_10s0116g01640	EnsemblPlantsGene:VIT_10s0116g01640	EnsemblPlants:VIT_10s0116g01640.t01	InterPro:X8
RefSeq:XP_003632942	RefSeq:XP_003632942.1	:	:	:	:

Description

No Description!

Coordinates

chr10:-:879903..883212

Molecular Weight (calculated)

61665.9 Da

IEP (calculated)

6.291

GRAVY (calculated)

-0.039

Length

567 amino acids

Sequence
(BLAST)

001: MADSKRFLLV FLICTVLSES GIVAEVKQTQ GRAEPFVGVN IGTDVSNLLS PADLVAFLKL QNIGHVRLYD ADSDILKALA RTKIRVIVSV PNNQLLAIGS
101: SNVTAATWIG RNVVAYYPET LITAIAVGDE VLTTVSSSAP LLLPAIEALY SALVAANLHT EIKISTPHAA SIILDPFPPS QAFFNQTLNP IILPLLQFLS
201: KTGSPLMMNL YPYYVFMQNK GVVPLDNSLF KPLTPSKEMV DPNTLLHYTN VLDAMIDSVY CSMKNLNVTD VMVLVTESGW PSRGDSKEPY ATIDNADTYN
301: SNLIKHVLDH SGSPLHPELT SSVYIYELFN EDLRSPPVSE ANWGLFHGNS TPVYLLHVSG SGTFLANDTT NQTFCIAMDG VDARTLQAAL DWACGPGRAN
401: CSEIQPGEGC YQPNNVKNHA SYAFDSYYQK EGRGSGSCDF KGVAMITTTD PSHGSCIFPG SKKISNKTKE AINGTEASGA AVQLRLVTVG SQINKAIKEN
501: RWGLGASQKR RYNMNASSSS TREERTPGWG LLGARPAICE IVVTSMMPQK GCEETMFLQR IKYPIME

Best Arabidopsis Sequence Match ( AT1G11820.2 )
(BLAST)

001: MAFTSMVSTV PVLFFFFTLL LISANSSSLS HNIKVQEQDK DPFVGFNIGT DVSNLLSPTE LVKFLQAQKV NHVRLYDADP ELLKALAKTK VRVIISVPNN
101: QLLAIGSSNS TAASWIGRNV VAYYPETLIT AISVGDEVLT TVPSSAPLLL PAIESLYNAL VASNLHTQIK VSTPHAASIM LDTFPPSQAY FNQTWHSIMV
201: PLLQFLSKTG SPLMMNLYPY YVYMQNKGVV PLDNCLFEPL TPSKEMVDPN TLLHYTNVLD AMVDAAYVSM KNLNVSDVAV LVTESGWPSK GDSKEPYATI
301: DNADTYNSNL IKHVFDRTGT PLHPEMTSSV YIYELFNEDL RAPPVSEASW GLFYGNSTPV YLLHVSGSGT FLANDTTNQT YCIAMDGVDA KTLQAALDWA
401: CGPGRSNCSE IQPGESCYQP NNVKGHASFA FNSYYQKEGR ASGSCDFKGV AMITTTDPSH GSCIFPGSKK VGNRTQTVVN STEVAAGEAT SRSLSRGFCV
501: TIMILVTFSI L

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65399]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.