Factsheet for Zm00001d021598_P005

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
vacuole 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36295	Sorghum	plasma membrane	77.51	94.27
Os07t0510200-01	Rice	plasma membrane	67.17	81.85
TraesCS2D01G230900.1	Wheat	plasma membrane	63.83	78.95
TraesCS2B01G274900.1	Wheat	plasma membrane	63.83	78.95
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	63.53	78.57
GSMUA_Achr4P27760_001	Banana	cytosol, extracellular, vacuole	25.38	67.89
GSMUA_Achr2P13900_001	Banana	cytosol	49.39	65.39
GSMUA_Achr4P33420_001	Banana	vacuole	49.39	63.35
AT1G11820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	43.47	55.97
KRH11452	Soybean	extracellular, vacuole	28.57	55.95
Bra016812.1-P	Field mustard	extracellular	43.01	54.53
CDY21013	Canola	extracellular	43.01	54.53
KRH51109	Soybean	vacuole	42.71	53.73
CDY31214	Canola	vacuole	42.55	53.64
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	42.1	52.86
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	32.98	52.54
KRH02051	Soybean	mitochondrion, vacuole	43.47	52.38
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	43.92	50.97
Zm00001d028243_P001	Maize	plasma membrane	38.3	50.2
Zm00001d048055_P001	Maize	plasma membrane	37.99	49.9
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	32.22	43.09
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	31.31	41.2
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	27.81	40.67
HORVU2Hr1G047410.3	Barley	vacuole	33.28	36.32
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	25.38	36.07
Zm00001d043524_P001	Maize	plasma membrane	27.05	35.89
Zm00001d018214_P001	Maize	extracellular	26.44	35.66
Zm00001d036051_P001	Maize	extracellular, vacuole	22.49	34.74
Zm00001d028410_P001	Maize	vacuole	18.84	34.35
Zm00001d031571_P001	Maize	extracellular	25.08	34.23
Zm00001d000117_P001	Maize	plastid, vacuole	20.06	33.25
Zm00001d021024_P001	Maize	extracellular	24.16	33.19
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	20.52	33.17
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	19.6	32.66
Zm00001d004768_P001	Maize	extracellular	22.49	32.6
Zm00001d030361_P001	Maize	plasma membrane	19.91	32.43
Zm00001d042767_P001	Maize	plasma membrane	19.91	31.64
Zm00001d010137_P001	Maize	extracellular	19.15	31.11
Zm00001d012292_P001	Maize	mitochondrion	20.06	30.99
Zm00001d013390_P001	Maize	extracellular	20.36	30.32
Zm00001d004763_P001	Maize	extracellular	21.73	30.3
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	18.84	29.67
Zm00001d046534_P001	Maize	plasma membrane	17.17	28.68
Zm00001d021690_P001	Maize	extracellular	25.08	28.25
Zm00001d028331_P001	Maize	plastid	21.73	27.5
Zm00001d019248_P001	Maize	extracellular, vacuole	20.36	26.91
Zm00001d006538_P001	Maize	vacuole	24.92	25.27
Zm00001d021695_P001	Maize	extracellular	24.77	25.19
Zm00001d021697_P001	Maize	extracellular	24.47	23.17

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100285928	Gene3D:3.20.20.80	Gene3D:3.90.230.10	MapMan:50.3.2	UniProt:A0A1D6ICM1
InterPro:Creatinase/aminopeptidase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	ProteinID:ONM57611.1
PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF120	SMART:SM00768
SUPFAM:SSF51445	SUPFAM:SSF55920	UniParc:UPI000220C663	InterPro:X8	EnsemblPlantsGene:Zm00001d021598	EnsemblPlants:Zm00001d021598_P005
EnsemblPlants:Zm00001d021598_T005	SEG:seg	:	:	:	:

Description

Glucan endo-1%2C3-beta-glucosidase 3

Coordinates

chr7:+:157735277..157745364

Molecular Weight (calculated)

69905.7 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.052

Length

658 amino acids

Sequence
(BLAST)

001: MQNGDIINID VNVFQNGYHG GTFRTFACGQ VNDSIKHFLN DQLHPSSTKR QARTLPLPRQ RHAAEISNLG GGREGDSWRK RSSAHQKKQS WTKEAVPEAG
101: TSRSRRSRAH YQIPMGSRSG GGSVSGSCLL LFPFLLLLHL ISLRSGPSAV LVSAAGSGEP YVGVTIGTQV TNLLSPSDLA SFLRAQRITR VRLYDADPRL
201: LSALAASGVR AIVGVPNDEL LALGSSPATA ASWVSRRVVP FAGVNSSTPN VVSAIAVGDE VPTALPSALP VLLPAIRSLA AALAAANLSS IPVSTPLPFS
301: VVVDPFPPSQ AFFNQSLDKS FVAPLLAHLA NTSAPLMLNL YPYYSLMQSK GVIPLDNALF RPLPPSMEMV DPNTLLRYTN VFDAMLDAVR VAVRNLNATG
401: GAGVPILVTE TGWPSYGDRR AEPYAGRDNA DAYNSNLIKH VLEEKAGTPM APGAGAQSSA YIYELFNEDL RAGPVSEANW GLFYGNGTPV YLLHVSGADG
501: FLGNDTTDRT FCVAADDADQ KAVQAAMDWA CGPGRADCTA IQPGQACYQP DDVRSHASFA FDAYYQSQGR AAGSCYFQGA GMVTTVDPSH DSCLFPGSKL
601: LNNATGSGNT NTSSTPTSDA EGSAIWRLRT GRDKGLLLFL RLVLSIAVAI VVDSNFWT

Best Arabidopsis Sequence Match ( AT1G11820.2 )
(BLAST)

001: MAFTSMVSTV PVLFFFFTLL LISANSSSLS HNIKVQEQDK DPFVGFNIGT DVSNLLSPTE LVKFLQAQKV NHVRLYDADP ELLKALAKTK VRVIISVPNN
101: QLLAIGSSNS TAASWIGRNV VAYYPETLIT AISVGDEVLT TVPSSAPLLL PAIESLYNAL VASNLHTQIK VSTPHAASIM LDTFPPSQAY FNQTWHSIMV
201: PLLQFLSKTG SPLMMNLYPY YVYMQNKGVV PLDNCLFEPL TPSKEMVDPN TLLHYTNVLD AMVDAAYVSM KNLNVSDVAV LVTESGWPSK GDSKEPYATI
301: DNADTYNSNL IKHVFDRTGT PLHPEMTSSV YIYELFNEDL RAPPVSEASW GLFYGNSTPV YLLHVSGSGT FLANDTTNQT YCIAMDGVDA KTLQAALDWA
401: CGPGRSNCSE IQPGESCYQP NNVKGHASFA FNSYYQKEGR ASGSCDFKGV AMITTTDPSH GSCIFPGSKK VGNRTQTVVN STEVAAGEAT SRSLSRGFCV
501: TIMILVTFSI L

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65399]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.