Factsheet for Zm00001d046134_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012475_P001
Zm00001d028793_P001
Zm00001d030045_P001
Zm00001d038436_P001
Zm00001d043014_P001
Zm00001d047037_P001
Zm00001d047705_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18340.1	Zm00001d012475_P001	AT2G38310.1	19407142
AT4G18340.1	Zm00001d028793_P001	AT2G38310.1	19407142
AT4G18340.1	Zm00001d038436_P001	AT2G38310.1	19407142
AT4G18340.1	Zm00001d043014_P001	AT2G38310.1	19407142
AT4G18340.1	Zm00001d047705_P001	AT2G38310.1	19407142
AT4G18340.1	Zm00001d030045_P001	AT4G17870.1	19407142
AT4G18340.1	Zm00001d047037_P001	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88444	Sorghum	extracellular, vacuole	92.87	92.65
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	74.45	74.81
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	74.2	74.57
TraesCS7B01G233500.1	Wheat	extracellular	73.71	74.07
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	71.01	65.83
VIT_10s0003g03690.t01	Wine grape	extracellular	55.77	60.53
Os06t0531000-00	Rice	vacuole	70.76	58.06
CDX99881	Canola	extracellular, vacuole	53.56	57.67
Bra032357.1-P	Field mustard	extracellular, vacuole	53.32	57.41
Bra010800.1-P	Field mustard	vacuole	52.33	55.76
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	54.05	55.14
CDY26296	Canola	extracellular, plasma membrane, vacuole	53.81	54.89
KRH11184	Soybean	endoplasmic reticulum, extracellular, vacuole	53.07	54.27
AT1G30080.1	Thale cress	vacuole	54.05	53.92
KRH21069	Soybean	vacuole	52.83	53.88
CDY63842	Canola	golgi, vacuole	38.08	53.82
CDX90225	Canola	vacuole	52.83	53.09
KRG89350	Soybean	extracellular, vacuole	51.11	52.0
CDY01532	Canola	vacuole	50.12	51.39
CDX90405	Canola	vacuole	49.88	51.13
Bra012604.1-P	Field mustard	vacuole	49.88	51.13
CDX78840	Canola	vacuole	50.37	51.12
Bra013297.1-P	Field mustard	vacuole	50.37	51.12
CDX99476	Canola	vacuole	50.37	51.12
AT4G18340.1	Thale cress	vacuole	49.63	50.88
CDX76528	Canola	extracellular, vacuole	48.89	50.25
CDY34065	Canola	extracellular, vacuole	48.4	48.76
KRH50394	Soybean	extracellular, vacuole	51.84	48.51
Zm00001d028410_P001	Maize	vacuole	39.8	44.88
Zm00001d000117_P001	Maize	plastid, vacuole	43.73	44.84
Zm00001d030361_P001	Maize	plasma membrane	43.49	43.81
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	42.51	43.8
Zm00001d042767_P001	Maize	plasma membrane	44.47	43.72
Zm00001d010137_P001	Maize	extracellular	43.0	43.21
Zm00001d012292_P001	Maize	mitochondrion	44.47	42.49
Zm00001d036051_P001	Maize	extracellular, vacuole	44.23	42.25
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	40.54	39.47
Zm00001d046534_P001	Maize	plasma membrane	37.84	39.09
Zm00001d018214_P001	Maize	extracellular	45.21	37.7
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	40.79	35.85
Zm00001d013390_P001	Maize	extracellular	38.08	35.07
Zm00001d031571_P001	Maize	extracellular	40.54	34.23
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	36.36	32.89
Zm00001d004768_P001	Maize	extracellular	34.89	31.28
Zm00001d021024_P001	Maize	extracellular	36.36	30.9
Zm00001d019248_P001	Maize	extracellular, vacuole	35.87	29.32
Zm00001d043524_P001	Maize	plasma membrane	35.63	29.23
Zm00001d004763_P001	Maize	extracellular	33.66	29.03
Zm00001d028331_P001	Maize	plastid	36.85	28.85
Zm00001d028243_P001	Maize	plasma membrane	33.17	26.89
Zm00001d021690_P001	Maize	extracellular	37.84	26.37
Zm00001d048055_P001	Maize	plasma membrane	32.43	26.35
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	31.45	26.02
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	30.96	25.2
Zm00001d006538_P001	Maize	vacuole	37.59	23.57
Zm00001d021695_P001	Maize	extracellular	36.12	22.72
Zm00001d021697_P001	Maize	extracellular	37.35	21.87
Zm00001d021598_P005	Maize	plasma membrane	33.17	20.52

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100191753	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:AQL03750.1	UniProt:B4FA15
EMBL:BT033953	EMBL:BT067286	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	PFAM:PF00332
PANTHER:PTHR32227	PANTHER:PTHR32227:SF85	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00017B6123	EnsemblPlantsGene:Zm00001d046134
EnsemblPlants:Zm00001d046134_P001	EnsemblPlants:Zm00001d046134_T001	SEG:seg	:	:	:

Description

Glycosyl hydrolase superfamily protein

Coordinates

chr9:+:65715514..65719719

Molecular Weight (calculated)

43264.9 Da

IEP (calculated)

5.766

GRAVY (calculated)

0.211

Length

407 amino acids

Sequence
(BLAST)

001: MASALSSLGP TALLICALLC TFLSSEVGFV RQATALGINY GQVANNLPPP AQVVQLLSSL RIGKVRIYDV NPQVLTAFAG TGIELVVTVP DDLVPGMASS
101: ASQALQWVSA SLRPYFPATR VTGIAVGNEV FTGDDEQLKA SLVPAMRNLH AALAQLGMDA YVRVSTANSL AVLATSYPPS QGVFTQAAAP YMAQLLRFLA
201: ETSSPFWVNA YPYFAYKDDP TKVSLDYALS NPSHVGAVDP FTKLQYTSML YAQVDAVTFA AARLGYGGVP VHVSETGWPS KGDANEAGAT VENARQYNRN
301: LLMRQVSGEG TPLRPRLRLE VYLFALFNED MKPGPASERN YGLYQPDMSM VYNVGLSQLA TTSAASLSLA TSPAARTTDV GKDYAGLCLV AVSVAILLIT
401: QQGSLLL

Best Arabidopsis Sequence Match ( AT1G30080.1 )
(BLAST)

001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.