Factsheet for Bra010800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 9
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90225	Canola	vacuole	98.95	93.33
Bra032357.1-P	Field mustard	extracellular, vacuole	88.22	89.15
CDY63842	Canola	golgi, vacuole	63.87	84.72
AT1G30080.1	Thale cress	vacuole	89.01	83.33
VIT_10s0003g03690.t01	Wine grape	extracellular	68.32	69.6
Bra013297.1-P	Field mustard	vacuole	63.35	60.35
Bra012604.1-P	Field mustard	vacuole	62.57	60.2
EER88444	Sorghum	extracellular, vacuole	56.02	52.45
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	55.76	52.33
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	54.19	51.11
TraesCS7B01G233500.1	Wheat	extracellular	54.19	51.11
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	54.19	51.11
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	53.66	46.7
Bra000508.1-P	Field mustard	extracellular, vacuole	44.24	43.33
Bra012015.1-P	Field mustard	plasma membrane, vacuole	45.81	41.97
Bra023293.1-P	Field mustard	extracellular	45.29	41.79
Os06t0531000-00	Rice	vacuole	54.19	41.73
Bra021137.1-P	Field mustard	plasma membrane	40.84	40.41
Bra028526.1-P	Field mustard	extracellular, vacuole	43.98	39.07
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	38.22	38.62
Bra033641.1-P	Field mustard	extracellular, vacuole	39.53	34.95
Bra035561.1-P	Field mustard	extracellular, vacuole	41.88	34.78
Bra015166.1-P	Field mustard	extracellular, vacuole	42.93	34.67
Bra002927.1-P	Field mustard	extracellular, vacuole	41.1	33.91
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	39.53	33.63
Bra039852.1-P	Field mustard	vacuole	39.53	32.4
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	41.62	32.25
Bra007162.1-P	Field mustard	extracellular	37.17	31.56
Bra014747.1-P	Field mustard	extracellular	36.65	31.04
Bra005028.1-P	Field mustard	extracellular	36.39	31.03
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.84	30.83
Bra003212.1-P	Field mustard	extracellular	35.86	30.51
Bra007161.1-P	Field mustard	extracellular	36.13	30.46
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	37.17	28.86
Bra010330.1-P	Field mustard	cytosol	38.74	28.3
Bra029639.1-P	Field mustard	vacuole	34.03	28.26
Bra026644.1-P	Field mustard	extracellular	36.39	27.97
Bra017659.1-P	Field mustard	vacuole	40.31	27.8
Bra028343.1-P	Field mustard	extracellular, vacuole	34.55	27.73
Bra001918.1-P	Field mustard	extracellular, vacuole	34.82	27.71
Bra028988.1-P	Field mustard	extracellular, vacuole	41.62	27.65
Bra014979.1-P	Field mustard	extracellular, vacuole	34.55	27.62
Bra032758.1-P	Field mustard	vacuole	34.55	27.5
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	35.6	27.09
Bra037057.1-P	Field mustard	extracellular, vacuole	33.25	26.51
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.55	26.35
Bra039757.1-P	Field mustard	extracellular, vacuole	34.55	26.14
Bra016812.1-P	Field mustard	extracellular	33.51	24.66
Bra038969.1-P	Field mustard	extracellular, vacuole	32.46	24.55
Bra027207.1-P	Field mustard	plastid	33.25	24.05
Bra001245.1-P	Field mustard	vacuole	34.29	23.14

Protein Annotations

EnsemblPlants:Bra010800.1	EnsemblPlants:Bra010800.1-P	EnsemblPlantsGene:Bra010800	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF85	PFAM:PF00332	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	UniParc:UPI00025470CE	UniProt:M4D2U7	MapMan:50.3.2	:

Description

AT1G30080 (E=5e-182) | glycosyl hydrolase family 17 protein

Coordinates

chrA08:+:16506040..16507383

Molecular Weight (calculated)

42016.3 Da

IEP (calculated)

6.032

GRAVY (calculated)

-0.054

Length

382 amino acids

Sequence
(BLAST)

001: MSKMFSRIAM TNYVVVLLLS LTSLEHGLLF QRVSSLGINY GQVGDNLPPP DKVIQLLGSL HINKTRIYDT NPKVLSSFAN SNIELFVTVE NQMLPSLVDP
101: QQALQWVTSR IKPFFPATKI GGIAVGNELY TDDDSSLIGY LVPAMTSIHA ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRRQVTGV MTQLLSFLHS
201: TKSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYHYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNLL
301: KRQLQSEGTP LRKNMGLDVY LFALFNEDLK PGPTSERNYG LYQPDETMAY NVGLLSSSQS STSSTNSIVS LTSSASTVCI NT

Best Arabidopsis Sequence Match ( AT1G30080.2 )
(BLAST)

001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST VCINI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.