Factsheet for Bra027421.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59252	Canola	extracellular, plasma membrane, vacuole	80.84	99.26
AT3G13560.4	Thale cress	plasma membrane	85.23	84.55
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	59.68	63.21
KRH42823	Soybean	extracellular, plasma membrane, vacuole	62.08	62.7
KRH58918	Soybean	endoplasmic reticulum	61.68	62.3
PGSC0003DMT400081837	Potato	extracellular	61.68	62.05
KRH05027	Soybean	extracellular, plasma membrane, vacuole	61.48	61.85
KRH16072	Soybean	extracellular, plasma membrane, vacuole	61.08	61.08
GSMUA_Achr8P15370_001	Banana	extracellular, plasma membrane, vacuole	51.3	49.52
GSMUA_Achr6P29690_001	Banana	extracellular, plasma membrane, vacuole	51.5	49.24
OQU90151	Sorghum	vacuole	48.5	49.19
Os07t0577300-01	Rice	extracellular	48.5	48.8
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	47.9	48.68
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	47.7	48.58
HORVU2Hr1G036980.5	Barley	plasma membrane	47.7	48.58
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	47.7	48.48
HORVU5Hr1G048630.2	Barley	plasma membrane, vacuole	47.9	48.39
Bra026644.1-P	Field mustard	extracellular	47.9	48.29
TraesCS2B01G220300.1	Wheat	plasma membrane	47.51	48.28
GSMUA_Achr2P17770_001	Banana	plasma membrane, vacuole	38.32	48.24
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	47.51	47.6
TraesCS5A01G155600.1	Wheat	plasma membrane	46.91	47.28
TraesCS5B01G153900.1	Wheat	plasma membrane	46.91	47.28
TraesCS5D01G160700.1	Wheat	plasma membrane	47.31	45.32
Bra039757.1-P	Field mustard	extracellular, vacuole	44.71	44.36
Bra016812.1-P	Field mustard	extracellular	43.71	42.2
Bra015166.1-P	Field mustard	extracellular, vacuole	36.13	38.27
Bra035561.1-P	Field mustard	extracellular, vacuole	33.93	36.96
Bra002927.1-P	Field mustard	extracellular, vacuole	33.93	36.72
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	35.13	35.77
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	35.73	35.38
Bra021137.1-P	Field mustard	plasma membrane	26.95	34.97
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	26.35	34.92
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	34.13	34.69
Bra010330.1-P	Field mustard	cytosol	36.13	34.61
Bra010800.1-P	Field mustard	vacuole	26.35	34.55
Bra039852.1-P	Field mustard	vacuole	32.14	34.55
Bra032357.1-P	Field mustard	extracellular, vacuole	25.95	34.39
Bra012604.1-P	Field mustard	vacuole	27.15	34.26
Bra029639.1-P	Field mustard	vacuole	31.34	34.13
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	30.54	34.08
Bra013297.1-P	Field mustard	vacuole	26.95	33.67
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.53	33.47
Bra014747.1-P	Field mustard	extracellular	29.74	33.04
Bra005028.1-P	Field mustard	extracellular	29.54	33.04
Bra003212.1-P	Field mustard	extracellular	29.54	32.96
Bra028343.1-P	Field mustard	extracellular, vacuole	31.14	32.77
Bra001918.1-P	Field mustard	extracellular, vacuole	31.34	32.71
Bra007161.1-P	Field mustard	extracellular	29.54	32.67
Bra023293.1-P	Field mustard	extracellular	26.55	32.13
Bra007162.1-P	Field mustard	extracellular	28.54	31.78
Bra014979.1-P	Field mustard	extracellular, vacuole	30.14	31.59
Bra000508.1-P	Field mustard	extracellular, vacuole	24.35	31.28
Bra017659.1-P	Field mustard	vacuole	34.33	31.05
Bra037057.1-P	Field mustard	extracellular, vacuole	29.54	30.9
Bra032758.1-P	Field mustard	vacuole	29.14	30.42
Bra028526.1-P	Field mustard	extracellular, vacuole	25.75	30.0
Bra033641.1-P	Field mustard	extracellular, vacuole	25.55	29.63
Bra038969.1-P	Field mustard	extracellular, vacuole	29.74	29.5
Bra028988.1-P	Field mustard	extracellular, vacuole	33.73	29.39
Bra012015.1-P	Field mustard	plasma membrane, vacuole	24.15	29.02
Bra001245.1-P	Field mustard	vacuole	29.54	26.15
Bra027207.1-P	Field mustard	plastid	22.16	21.02

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra027421	EnsemblPlants:Bra027421.1	EnsemblPlants:Bra027421.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4EF59	PFAM:PF00332	PFAM:PF07983
ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF232	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0002547FA1	InterPro:X8	SEG:seg	:	:

Description

AT3G13560 (E=7e-233) | glycosyl hydrolase family 17 protein

Coordinates

chrA05:+:20819811..20821538

Molecular Weight (calculated)

53648.6 Da

IEP (calculated)

5.340

GRAVY (calculated)

-0.006

Length

501 amino acids

Sequence
(BLAST)

001: MLLPRWFLEA ILLLISALAF TNAAFIGVNI GTDLTNMPSP SDIVSLLKSH QITHVRLYDA NSHMLKALSN TTIQVTVGVT NQEILKIGRF PSSAASWVNK
101: NVAAYVPSTN ITAIAVGSEV LTESPHVAPI LASALNNIHK ALVATNLNFQ VKVSTPMSMD VMPKPFPPST STFSPSWNTT VHQILQFLDN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSAVKQIVD PNTLLHYDSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDETAA TVGNAETFNS NLIKRVLNNS
301: GPPSKPDIPI NTYIYELYNE DKRSGPESEK NWGMFYPNGT SVYPLGLSGS GGGGGGSEAL NGTTLFCVAK VDADDDKLED GLNWACGQGR ANCGPIQPGQ
401: ACYLPNDIKS HASFAYNDYY QKMKGVGGTC DFDGTAITTP RDPSYRTCAY TGSPNANGTG GNFPPALGPA SQVGGNANAV FVSIYHLPFL ATLALTLLLV
501: L

Best Arabidopsis Sequence Match ( AT3G13560.4 )
(BLAST)

001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.