Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- vacuole 4
- extracellular 3
- endoplasmic reticulum 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G155600.1 | Wheat | plasma membrane | 97.38 | 97.38 |
| HORVU5Hr1G048630.2 | Barley | plasma membrane, vacuole | 94.37 | 94.56 |
| TraesCS5D01G160700.1 | Wheat | plasma membrane | 97.99 | 93.12 |
| TraesCS2B01G220300.1 | Wheat | plasma membrane | 85.51 | 86.21 |
| OQU90151 | Sorghum | vacuole | 80.28 | 80.77 |
| Os07t0577300-01 | Rice | extracellular | 80.89 | 80.72 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 78.47 | 79.27 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 77.67 | 77.2 |
| GSMUA_Achr2P17770_001 | Banana | plasma membrane, vacuole | 51.71 | 64.57 |
| GSMUA_Achr8P15370_001 | Banana | extracellular, plasma membrane, vacuole | 65.19 | 62.43 |
| GSMUA_Achr6P29690_001 | Banana | extracellular, plasma membrane, vacuole | 63.98 | 60.69 |
| KRH58918 | Soybean | endoplasmic reticulum | 54.12 | 54.23 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 53.72 | 53.83 |
| VIT_06s0004g00720.t01 | Wine grape | extracellular, vacuole | 50.3 | 52.85 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 52.31 | 51.9 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 51.71 | 51.61 |
| PGSC0003DMT400081837 | Potato | extracellular | 50.91 | 50.8 |
| AT3G13560.4 | Thale cress | plasma membrane | 50.5 | 49.7 |
| Bra027421.1-P | Field mustard | extracellular, plasma membrane, vacuole | 47.28 | 46.91 |
| CDY59252 | Canola | extracellular, plasma membrane, vacuole | 37.42 | 45.59 |
| CDY23618 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.23 | 45.13 |
| TraesCS4B01G242300.1 | Wheat | extracellular | 44.67 | 44.4 |
| TraesCS2B01G274900.1 | Wheat | plasma membrane | 40.44 | 37.78 |
| TraesCS6B01G355600.1 | Wheat | vacuole | 34.81 | 36.19 |
| TraesCS3B01G311300.2 | Wheat | vacuole | 35.81 | 33.52 |
| TraesCS4B01G020100.1 | Wheat | extracellular | 30.58 | 32.83 |
| TraesCS2B01G459400.1 | Wheat | extracellular | 30.18 | 32.61 |
| TraesCS3B01G406200.2 | Wheat | extracellular, plasma membrane, vacuole | 26.36 | 32.11 |
| TraesCS4B01G142000.1 | Wheat | golgi | 28.77 | 30.95 |
| TraesCS7B01G153600.1 | Wheat | vacuole | 29.78 | 30.02 |
| TraesCS7B01G285700.2 | Wheat | extracellular | 33.2 | 29.52 |
| TraesCS4B01G053700.2 | Wheat | vacuole | 24.75 | 29.43 |
| TraesCS7B01G233500.1 | Wheat | extracellular | 23.94 | 29.38 |
| TraesCS7B01G279900.1 | Wheat | golgi, vacuole | 23.34 | 29.07 |
| TraesCS1B01G285400.2 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 23.94 | 28.95 |
| TraesCS1B01G454200.1 | Wheat | extracellular, vacuole | 23.34 | 28.93 |
| TraesCS3B01G278400.1 | Wheat | extracellular, vacuole | 22.74 | 28.9 |
| TraesCS1B01G072500.1 | Wheat | extracellular, vacuole | 23.54 | 28.82 |
| TraesCS2B01G311200.1 | Wheat | extracellular, plasma membrane, vacuole | 22.54 | 28.64 |
| TraesCS2B01G241200.3 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.59 | 28.04 |
| TraesCS1B01G072600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 22.54 | 27.79 |
| TraesCS2B01G241300.1 | Wheat | extracellular, vacuole | 30.58 | 27.59 |
| TraesCS4B01G225100.1 | Wheat | vacuole | 23.14 | 27.51 |
| TraesCS1B01G453900.1 | Wheat | vacuole | 29.98 | 26.09 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 24.14 | 26.03 |
| TraesCS6B01G188000.1 | Wheat | plastid | 23.14 | 26.02 |
| TraesCS1B01G454500.1 | Wheat | vacuole | 28.97 | 25.67 |
| TraesCS5B01G279000.2 | Wheat | extracellular | 27.77 | 24.78 |
| TraesCS5B01G329800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 23.74 | 24.08 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| PFAM:PF00332 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF232 | SMART:SM00768 | SUPFAM:SSF51445 |
| SignalP:SignalP-TM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G153900 | EnsemblPlants:TraesCS5B01G153900.1 | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr5B:+:283233889..283238227
Molecular Weight (calculated)
53264.2 Da
IEP (calculated)
5.535
GRAVY (calculated)
0.055
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGRNNMSPD RLEAVLMLLM LMVYNASGAF VGINIGTNVS DLPSASDIVS ILKAKKIQHV RLVDSDHEML VALANTGIEV MVGVPNNQLL RMGQSRPTAA
101: DWINKNVAAY IPATNITYIA VGDEILTTVP NAALVLVPAL QFLQSALLAA NLNTQVKLSS PHSMDMISKA FPPSTATFNS TWSSVMLQYL GFLKKTGSSF
201: MLNAQPYYGY VKGQGVFPLE YALFRSLNPN SQIADPNTNL FYTNMFDAMV DATYNSIKAM NFTDIPVMVT ASGWPWHSAR KEPAADVDNA LAYNTNLIRH
301: VLNNSGTPSQ PNNQVSTYLF ELFSEDLRSG SVSGESWGIM FSNASAVYSL TFEDVATAST DSPALHGMFC VANSSAPHSA LKQSLDWACG PGSANCSAIQ
401: PGQPCYKPDD IVAVASYAFN DYYHRTQASG GTCNFNSTAT ISSTDPSHGS CKFAGSTGAN GSGMASGPAS QDSSASQSQS FWLTWLIAML LPVLLLM
101: DWINKNVAAY IPATNITYIA VGDEILTTVP NAALVLVPAL QFLQSALLAA NLNTQVKLSS PHSMDMISKA FPPSTATFNS TWSSVMLQYL GFLKKTGSSF
201: MLNAQPYYGY VKGQGVFPLE YALFRSLNPN SQIADPNTNL FYTNMFDAMV DATYNSIKAM NFTDIPVMVT ASGWPWHSAR KEPAADVDNA LAYNTNLIRH
301: VLNNSGTPSQ PNNQVSTYLF ELFSEDLRSG SVSGESWGIM FSNASAVYSL TFEDVATAST DSPALHGMFC VANSSAPHSA LKQSLDWACG PGSANCSAIQ
401: PGQPCYKPDD IVAVASYAFN DYYHRTQASG GTCNFNSTAT ISSTDPSHGS CKFAGSTGAN GSGMASGPAS QDSSASQSQS FWLTWLIAML LPVLLLM
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.