Factsheet for TraesCS5B01G329800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, vacuole

Predictor Summary:

mitochondrion 3
vacuole 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	90.2	93.64
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	90.0	91.49
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	80.2	78.13
Zm00001d019248_P001	Maize	extracellular, vacuole	60.61	59.64
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	60.41	59.08
KXG34744	Sorghum	vacuole	57.76	55.93
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	42.45	46.53
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	38.37	43.72
CDY53692	Canola	extracellular	38.57	42.09
Bra003212.1-P	Field mustard	extracellular	38.37	41.87
Bra007162.1-P	Field mustard	extracellular	38.37	41.78
CDY40219	Canola	extracellular	38.37	41.78
TraesCS4B01G142000.1	Wheat	golgi	39.39	41.77
CDY41232	Canola	extracellular	38.37	41.69
CDY62387	Canola	extracellular	38.16	41.65
AT3G55430.1	Thale cress	extracellular	37.96	41.43
KRH01668	Soybean	extracellular	38.16	41.01
CDY40218	Canola	extracellular	37.55	40.62
CDY41234	Canola	extracellular	37.55	40.44
Bra007161.1-P	Field mustard	extracellular	37.35	40.4
Solyc07g005330.2.1	Tomato	extracellular	37.76	40.3
CDX76097	Canola	extracellular	36.94	40.13
CDY02936	Canola	extracellular	36.94	40.04
Bra014747.1-P	Field mustard	extracellular	36.73	39.91
PGSC0003DMT400008245	Potato	vacuole	36.73	38.96
PGSC0003DMT400060499	Potato	extracellular	38.16	37.1
TraesCS2B01G459400.1	Wheat	extracellular	34.29	36.52
Solyc05g054440.2.1	Tomato	unclear	38.16	35.55
Bra005028.1-P	Field mustard	extracellular	32.45	35.49
CDY20461	Canola	extracellular	32.45	35.33
CDY53600	Canola	extracellular	32.24	35.11
TraesCS7B01G233500.1	Wheat	extracellular	28.78	34.81
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	27.76	34.78
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	27.35	34.27
TraesCS4B01G053700.2	Wheat	vacuole	28.98	33.97
TraesCS4B01G020100.1	Wheat	extracellular	31.43	33.26
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	27.76	33.09
TraesCS4B01G225100.1	Wheat	vacuole	28.16	33.01
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	27.14	32.76
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	26.94	32.75
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	26.53	32.42
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	26.94	32.35
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	28.98	30.8
TraesCS6B01G355600.1	Wheat	vacuole	30.0	30.75
TraesCS7B01G279900.1	Wheat	golgi, vacuole	24.49	30.08
TraesCS6B01G188000.1	Wheat	plastid	26.33	29.19
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	32.24	28.78
TraesCS7B01G153600.1	Wheat	vacuole	27.76	27.59
TraesCS3B01G311300.2	Wheat	vacuole	27.76	25.61
TraesCS1B01G454500.1	Wheat	vacuole	28.98	25.31
TraesCS7B01G285700.2	Wheat	extracellular	28.78	25.22
TraesCS2B01G220300.1	Wheat	plasma membrane	25.31	25.15
TraesCS4B01G242300.1	Wheat	extracellular	25.51	25.0
TraesCS1B01G453900.1	Wheat	vacuole	28.98	24.87
TraesCS5B01G153900.1	Wheat	plasma membrane	24.08	23.74
TraesCS2B01G274900.1	Wheat	plasma membrane	25.71	23.68
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	26.53	23.59
TraesCS5B01G279000.2	Wheat	extracellular	26.33	23.16
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	26.33	23.04

Protein Annotations

EnsemblPlants:TraesCS5B01G329800.1	EnsemblPlantsGene:TraesCS5B01G329800	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	PFAM:PF00332	ScanProsite:PS00587	SEG:seg
SUPFAM:SSF51445	TMHMM:TMhelix	MapMan:50.3.2	:	:	:

Description

No Description!

Coordinates

chr5B:-:513735257..513736893

Molecular Weight (calculated)

51679.9 Da

IEP (calculated)

5.291

GRAVY (calculated)

0.001

Length

490 amino acids

Sequence
(BLAST)

001: MGTSRHHLLG LCPAGHPPVA HRLTMGPPPR HGFMLRAEVV ICIFLVIAPF SMAIGVNYGT KGDNLPSPAK VAAFLVTRTN IDRVKLFDIK PDIIRAFAGT
101: GISVMVTTSN GDIPGLATQN GADAWVATNI APYYPATDIS LIAVGNEIMD TADKNLIGNL VPAMQTLKAA LVTAGYGKIR VSTPSSLGIL VDAQPPSAAR
201: FRDVWDVAIF TPMLQFLRKT KSPLIVNTYP YFGYNGDTLP YALARPNPGV LDTGTGITYT SMLEAQLDSV YSAMKKLGFE DVEILVGETG WPTKAMDGQI
301: GVSPAEAAEY NKYLIGAVTS GSGTLLMPKR KFETYIFALF NEDLKPGPVA ERNFGMFQPD FTPMYDIGIM KDPVKTAPPM AATAHALEAA APTEANGSNS
401: AKASAPASST GNKSSTTDEA EGSDAQSSTK SEQSEAAAKG GDGEEEISEK TKPKEESATP PAAGAASEAT NFLFPIPCIL AVALCLTVHV

Best Arabidopsis Sequence Match ( AT5G24318.4 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT VINHRRNSQH YLVSYMLTNL FL

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.