Factsheet for TraesCS4B01G020100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G293500.1	Wheat	plasma membrane	95.25	94.23
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	90.06	88.53
Os03t0669300-02	Rice	endoplasmic reticulum	81.64	81.47
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	77.54	77.54
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	89.63	77.43
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	77.97	76.0
GSMUA_Achr7P08120_001	Banana	plastid	45.79	65.84
GSMUA_Achr7P26810_001	Banana	plastid	38.44	60.14
KRH24481	Soybean	cytosol	45.14	58.06
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	57.45	57.95
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	56.59	57.08
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	56.8	56.56
PGSC0003DMT400001908	Potato	extracellular	57.02	56.17
Solyc01g109570.2.1	Tomato	extracellular	57.02	55.81
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	58.1	54.9
TraesCS4B01G053700.2	Wheat	vacuole	49.24	54.55
KRH15221	Soybean	extracellular	56.59	54.13
CDX69064	Canola	extracellular, plasma membrane, vacuole	57.88	53.07
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	57.67	52.98
CDX75437	Canola	extracellular, plasma membrane, vacuole	57.88	52.96
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.88	52.96
Bra039852.1-P	Field mustard	vacuole	53.13	52.79
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	50.32	50.98
Solyc04g080260.2.1	Tomato	extracellular	48.38	50.79
PGSC0003DMT400013154	Potato	extracellular, vacuole	47.95	50.34
AT2G16230.1	Thale cress	vacuole	54.21	49.9
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	46.44	49.09
Bra033641.1-P	Field mustard	extracellular, vacuole	45.79	49.07
CDY22386	Canola	extracellular, vacuole	45.57	48.84
CDY37244	Canola	vacuole	54.0	48.83
CDY26761	Canola	vacuole	53.56	48.44
Bra017659.1-P	Field mustard	vacuole	57.88	48.38
CDX71547	Canola	extracellular, vacuole	45.36	48.17
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	47.52	47.72
TraesCS4B01G142000.1	Wheat	golgi	41.25	41.34
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	34.34	40.66
TraesCS2B01G459400.1	Wheat	extracellular	39.74	40.0
TraesCS7B01G233500.1	Wheat	extracellular	34.34	39.26
TraesCS6B01G355600.1	Wheat	vacuole	40.17	38.91
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	32.83	38.87
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	32.61	37.19
TraesCS4B01G225100.1	Wheat	vacuole	33.05	36.6
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	32.18	36.25
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	31.75	36.03
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.45	34.99
TraesCS7B01G279900.1	Wheat	golgi, vacuole	29.59	34.34
TraesCS6B01G188000.1	Wheat	plastid	32.18	33.71
TraesCS7B01G153600.1	Wheat	vacuole	35.85	33.67
TraesCS4B01G242300.1	Wheat	extracellular	36.29	33.6
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	28.29	32.67
TraesCS7B01G285700.2	Wheat	extracellular	38.88	32.2
TraesCS3B01G311300.2	Wheat	vacuole	36.5	31.83
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	33.26	31.43
TraesCS2B01G220300.1	Wheat	plasma membrane	33.26	31.24
TraesCS2B01G274900.1	Wheat	plasma membrane	35.64	31.02
TraesCS5B01G279000.2	Wheat	extracellular	37.15	30.88
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	37.15	30.71
TraesCS5B01G153900.1	Wheat	plasma membrane	32.83	30.58
TraesCS1B01G454500.1	Wheat	vacuole	35.85	29.59
TraesCS1B01G453900.1	Wheat	vacuole	35.85	29.07
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	34.56	29.04

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF228	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G020100	EnsemblPlants:TraesCS4B01G020100.1	InterPro:X8	SEG:seg

Description

No Description!

Coordinates

chr4B:+:14266179..14268038

Molecular Weight (calculated)

47672.2 Da

IEP (calculated)

4.684

GRAVY (calculated)

0.091

Length

463 amino acids

Sequence
(BLAST)

001: MEAESRKLLL LAPILLCCFM ARSEAQSQHI GVNYGEVADN LPPPDATARL LKSTAITKLR LYGVDAGVIR ALAGTGVSLV LGVANGDIPA IAADPNAAAG
101: WLAANVLPFL PASAISVVAV GNEVLESGDA ALAAALLPAM QNLRAAAVAA GDAAAAGIKF STVNTMAVLA QSDPPSTGAF RPDAAAQLQG ILGFLSRTGA
201: PFMVNPYPYF AYQSDPRPDT LAFCLFHPNA GRLDAGSRIT YANMFDAQVD AVKSALGRAG YGAVDIVVAE TGWPTRGDPT EQGATVDNAR AYVSNLVAHL
301: RSGAGTPLMP GRPVDTYLFA LYDEDLKPGP ASERSFGLYH TDLTMAYDAG LTSDAATTTP TPTTPTSPSK GSGGWCVASA GATDAQLQTD LDYACSQVGV
401: DCGAIQPGGA CFQPNTVRAH AAYAMNQLYQ AAGGHPWNCD FRQSATLTST NPSYGSCVFT GGQ

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.