Factsheet for TraesCS4D01G018300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G293500.1	Wheat	plasma membrane	90.66	91.24
TraesCS4B01G020100.1	Wheat	extracellular	88.53	90.06
Os03t0669300-02	Rice	endoplasmic reticulum	77.92	79.09
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	75.16	76.46
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	76.43	75.79
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	84.71	74.44
GSMUA_Achr7P08120_001	Banana	plastid	44.59	65.22
GSMUA_Achr7P26810_001	Banana	plastid	37.37	59.46
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	56.48	57.95
KRH24481	Soybean	cytosol	44.16	57.78
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	55.63	57.08
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	55.84	56.56
PGSC0003DMT400001908	Potato	extracellular	54.99	55.11
Solyc01g109570.2.1	Tomato	extracellular	55.2	54.97
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	56.9	54.69
KRH15221	Soybean	extracellular	56.05	54.55
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	57.32	53.57
CDX75437	Canola	extracellular, plasma membrane, vacuole	57.32	53.36
CDX69064	Canola	extracellular, plasma membrane, vacuole	57.11	53.27
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.11	53.16
TraesCS4D01G053700.1	Wheat	vacuole	47.35	52.72
Bra039852.1-P	Field mustard	vacuole	51.59	52.15
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	48.83	50.33
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	46.5	50.0
Solyc04g080260.2.1	Tomato	extracellular	46.5	49.66
PGSC0003DMT400013154	Potato	extracellular, vacuole	46.28	49.43
AT2G16230.1	Thale cress	vacuole	52.65	49.3
Bra017659.1-P	Field mustard	vacuole	57.54	48.92
Bra033641.1-P	Field mustard	extracellular, vacuole	44.8	48.84
CDY22386	Canola	extracellular, vacuole	44.59	48.61
CDY37244	Canola	vacuole	52.44	48.24
CDY26761	Canola	vacuole	52.02	47.85
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	44.37	47.72
CDX71547	Canola	extracellular, vacuole	44.16	47.71
TraesCS2D01G436800.1	Wheat	vacuole	35.46	42.39
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	39.49	41.43
TraesCS6D01G305000.1	Wheat	extracellular	40.55	39.87
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	35.67	39.16
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	33.55	39.01
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	31.42	37.95
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	31.85	37.04
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	31.85	37.04
TraesCS3D01G249500.1	Wheat	vacuole	33.76	36.98
TraesCS5D01G335600.1	Wheat	vacuole	30.79	36.9
TraesCS4D01G225700.1	Wheat	vacuole	32.27	36.36
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	30.79	35.63
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	34.18	34.26
TraesCS6D01G148900.1	Wheat	plastid	31.0	32.96
TraesCS4D01G241900.1	Wheat	extracellular	34.82	32.8
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	32.7	32.63
TraesCS3D01G277300.4	Wheat	vacuole	35.88	31.89
TraesCS5D01G400400.1	Wheat	extracellular	33.33	31.78
TraesCS7D01G374900.1	Wheat	plastid, vacuole	29.3	31.22
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	32.27	30.83
TraesCS2D01G230900.1	Wheat	plasma membrane	34.39	30.45
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	35.03	29.57
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	34.39	28.77
TraesCS1D01G431300.1	Wheat	vacuole	34.61	28.4
TraesCS5D01G160700.1	Wheat	plasma membrane	31.42	28.3
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	32.91	28.18
TraesCS2D01G200900.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4D01G018300.1	EnsemblPlantsGene:TraesCS4D01G018300	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
InterPro:X8	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF228	PFAM:PF00332	PFAM:PF07983
ScanProsite:PS00587	SEG:seg	SMART:SM00768	SUPFAM:SSF51445	MapMan:50.3.2	:

Description

No Description!

Coordinates

chr4D:-:7896789..7899492

Molecular Weight (calculated)

49091.9 Da

IEP (calculated)

5.006

GRAVY (calculated)

0.029

Length

471 amino acids

Sequence
(BLAST)

001: MILQTCFEFM NIFVQHFLEL VEHFLKFTEK RPYAQSQHIG VNYGEVADNL PPPDATARLL KSTAITKLRL YGVDAGLIRA LAGTGVSLVL GVANGDIPAI
101: AADPNAATGW LAANVLPFLP ATTISVVAVG NEVLESGDAA LAAALLPAMQ NLRAAAGDGP AAGIKFSTVN TMAVLAQSDP PSAGAFRPEA AAQLQGILGF
201: LSRTGAPFMV NPYPYFAYQS DPRPDTLAFC LFHPNAGRLD AGSKITYTNM FDAQVDAVKS ALGRAGYGAV DIVVAETGWP TRGDPTEQGA TVDNARAYVS
301: NLVAHLRSGA GTPLMPGKPV DTYLFALYDE DLKPGPASER AFGLYHTDLT MAYDAGLTSS SPGSGGGSTA TTPTTTPSKR SGWCVASAGA TDAQLQTDLD
401: YACSQVGVDC GAIQPGGACF QPNTVRAHAA YAMNQLYQAA GSHPWNCDFR QSATLTSTNP SYGSCVFTGG Q

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.