Factsheet for TraesCS6D01G305000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	93.53	96.34
TraesCS6B01G355600.1	Wheat	vacuole	95.41	95.61
Os02t0771700-01	Rice	extracellular	85.8	84.22
EES07606	Sorghum	extracellular, vacuole	81.84	79.84
Zm00001d018214_P001	Maize	extracellular	81.21	79.71
HORVU6Hr1G079630.2	Barley	mitochondrion, plastid, vacuole	78.91	69.87
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	58.87	68.95
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	59.29	67.46
CDY20780	Canola	extracellular, vacuole	57.41	61.25
CDY06601	Canola	endoplasmic reticulum, extracellular	57.2	61.02
Bra035561.1-P	Field mustard	extracellular, vacuole	57.83	60.22
CDY17308	Canola	extracellular, vacuole	56.16	59.91
CDY56498	Canola	extracellular, vacuole	54.91	59.5
CDY12009	Canola	extracellular, vacuole	56.78	59.13
CDY36734	Canola	extracellular, vacuole	56.78	59.13
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	58.04	59.02
Solyc07g049370.2.1	Tomato	extracellular, vacuole	57.62	58.97
KRH73361	Soybean	extracellular, vacuole	58.04	58.9
PGSC0003DMT400001833	Potato	extracellular, vacuole	57.41	58.76
CDY19908	Canola	extracellular, vacuole	56.16	58.61
CDY18049	Canola	extracellular, vacuole	54.07	58.6
CDY46679	Canola	extracellular, vacuole	54.28	58.3
KRH14333	Soybean	endoplasmic reticulum, extracellular	55.95	58.13
KRH14776	Soybean	extracellular, vacuole	57.83	58.07
AT2G05790.1	Thale cress	extracellular, vacuole	57.2	58.05
CDX92794	Canola	endoplasmic reticulum, extracellular	54.28	57.65
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	55.95	57.63
Bra002927.1-P	Field mustard	extracellular, vacuole	55.53	57.45
Bra015166.1-P	Field mustard	extracellular, vacuole	56.58	57.29
KRH73795	Soybean	extracellular, vacuole	56.37	57.2
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	56.16	57.11
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	54.28	56.64
PGSC0003DMT400033482	Potato	extracellular, vacuole	55.32	55.91
Solyc12g014420.1.1	Tomato	extracellular	55.53	55.42
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	54.7	53.14
PGSC0003DMT400033484	Potato	extracellular, vacuole	44.05	52.88
Bra028988.1-P	Field mustard	extracellular, vacuole	56.37	46.96
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	53.44	45.47
TraesCS1D01G431300.1	Wheat	vacuole	54.07	45.12
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	51.98	44.62
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	50.94	44.36
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	36.95	43.7
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	36.33	42.96
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	35.91	42.26
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	34.86	41.23
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	39.87	40.55
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	32.78	40.26
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	39.46	40.21
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	35.91	40.09
TraesCS2D01G436800.1	Wheat	vacuole	32.57	39.59
TraesCS4D01G225700.1	Wheat	vacuole	34.45	39.47
TraesCS5D01G335600.1	Wheat	vacuole	31.11	37.91
TraesCS3D01G249500.1	Wheat	vacuole	33.82	37.67
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	35.07	37.42
TraesCS4D01G053700.1	Wheat	vacuole	32.57	36.88
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	37.79	36.71
TraesCS4D01G241900.1	Wheat	extracellular	37.58	36.0
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	32.78	35.84
TraesCS5D01G400400.1	Wheat	extracellular	36.53	35.43
TraesCS3D01G277300.4	Wheat	vacuole	38.83	35.09
TraesCS7D01G374900.1	Wheat	plastid, vacuole	31.73	34.39
TraesCS6D01G148900.1	Wheat	plastid	30.9	33.41
TraesCS5D01G160700.1	Wheat	plasma membrane	36.12	33.08
TraesCS2D01G230900.1	Wheat	plasma membrane	36.33	32.71
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	31.94	32.42
TraesCS2D01G200900.1	Wheat	plastid	0.42	1.04

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF102	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6D01G305000	EnsemblPlants:TraesCS6D01G305000.1	InterPro:X8	SEG:seg

Description

No Description!

Coordinates

chr6D:+:414000154..414003074

Molecular Weight (calculated)

49701.2 Da

IEP (calculated)

8.170

GRAVY (calculated)

0.064

Length

479 amino acids

Sequence
(BLAST)

001: MAPPRGRLLA AALCLLFLAG ADAGTVGVNW GRVANDLPSP AAVVQLLKQH GIAQVKLYDT EPAVLRALAG SGIKVVVALP NEQLAAAARR PSYALAWVRR
101: NVAAYYPATQ IQGIAVGNEV FATAANVTAQ LVPAMTNVHA ALARLNMDKA VKVSSPVALS ALANSYPPSA GVFREELAQS VMKPMLDFLA RTGSDLMVNC
201: YPFFAYADNA GVISLDYALF RPNAGELDSG SGLKYYSLLD AQLDAVFAAV GKLGSYNGVH VVVSETGWPS KGDAKEVGAG AANAAAYNGN LVRRVLSRNA
301: GTPRRPDADV DVYLFALFNE NQKPGPTSER NYGVFYPNQQ KVYDVEFVLG GGSVGGKGNG GLGWQDNGGG SAVPAGGGGV VRAAATPGEA WCVANAMAGE
401: ARLHAALDYA CGPGGADCKG IQPGAACFEP NTMVAHASYA FNDYYQRKGR SIGTCDFAGA AYVVNQAPKM GKCELPSTV

Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)

001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.