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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 18372294
extracellular: 19038476
extracellular: 19226311
extracellular: 24083427
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID: 19226311 doi
WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G305000.1 Wheat extracellular 84.22 85.8
TraesCS6B01G355600.1 Wheat vacuole 83.61 85.36
EES07606 Sorghum extracellular, vacuole 85.25 84.73
TraesCS6A01G325300.1 Wheat cytosol, extracellular, vacuole 80.53 84.52
Zm00001d018214_P001 Maize extracellular 82.99 82.99
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 61.07 70.78
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 59.02 70.42
HORVU6Hr1G079630.2 Barley mitochondrion, plastid, vacuole 71.72 64.69
CDY06601 Canola endoplasmic reticulum, extracellular 57.17 62.14
CDY20780 Canola extracellular, vacuole 56.97 61.92
KRH14333 Soybean endoplasmic reticulum, extracellular 57.58 60.95
Bra035561.1-P Field mustard extracellular, vacuole 57.38 60.87
CDY46679 Canola extracellular, vacuole 55.33 60.54
CDY12009 Canola extracellular, vacuole 56.97 60.43
CDY36734 Canola extracellular, vacuole 56.97 60.43
CDY17308 Canola extracellular, vacuole 55.53 60.36
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 58.2 60.3
CDX92794 Canola endoplasmic reticulum, extracellular 55.33 59.87
KRH73795 Soybean extracellular, vacuole 57.79 59.75
CDY56498 Canola extracellular, vacuole 53.89 59.5
CDY19908 Canola extracellular, vacuole 55.53 59.04
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 56.97 59.02
CDY18049 Canola extracellular, vacuole 53.28 58.82
KRH73361 Soybean extracellular, vacuole 56.76 58.69
Solyc07g049370.2.1 Tomato extracellular, vacuole 55.94 58.33
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 55.53 58.28
AT2G05790.1 Thale cress extracellular, vacuole 56.35 58.26
PGSC0003DMT400001833 Potato extracellular, vacuole 55.74 58.12
KRH14776 Soybean extracellular, vacuole 56.76 58.07
Bra002927.1-P Field mustard extracellular, vacuole 54.92 57.88
Bra015166.1-P Field mustard extracellular, vacuole 55.94 57.72
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 53.69 57.08
PGSC0003DMT400033482 Potato extracellular, vacuole 55.12 56.75
Solyc12g014420.1.1 Tomato extracellular 55.12 56.04
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 55.33 54.77
PGSC0003DMT400033484 Potato extracellular, vacuole 44.06 53.88
Bra028988.1-P Field mustard extracellular, vacuole 56.35 47.83
Os07t0538000-01 Rice extracellular 53.48 46.77
Os07t0539400-00 Rice extracellular, plastid, vacuole 47.75 44.72
Os01t0860800-01 Rice extracellular 35.66 43.72
Os10t0160100-01 Rice extracellular, vacuole 37.5 43.57
Os07t0539100-01 Rice extracellular 48.98 43.22
Os08t0244500-00 Rice extracellular 49.59 42.98
Os07t0539300-01 Rice extracellular 49.39 41.77
Os03t0669300-02 Rice endoplasmic reticulum 39.55 41.59
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 39.55 41.42
Os01t0739700-01 Rice plasma membrane 41.19 40.77
Os03t0246100-01 Rice extracellular, vacuole 35.66 40.47
Os02t0532900-01 Rice endoplasmic reticulum, extracellular 32.38 40.41
Os09t0502200-01 Rice extracellular 39.55 40.21
Os07t0539900-01 Rice extracellular 49.39 40.03
Os04t0412300-01 Rice plasma membrane, plastid, vacuole 32.99 39.56
Os03t0227400-01 Rice plasma membrane 29.1 38.9
Os04t0681950-00 Rice vacuole 35.86 38.8
Os06t0131500-01 Rice plastid 34.63 37.64
Os11t0704600-01 Rice extracellular 36.27 37.5
Os02t0200300-02 Rice golgi, mitochondrion, vacuole 32.58 37.5
Os03t0845600-01 Rice extracellular, vacuole 36.27 37.34
Os03t0221500-01 Rice extracellular, plasma membrane, vacuole 37.3 36.11
Os07t0577300-01 Rice extracellular 36.07 35.34
Os03t0722500-01 Rice extracellular, plasma membrane, vacuole 32.38 35.27
Os06t0531000-00 Rice vacuole 35.25 34.68
Os07t0510200-01 Rice plasma membrane 37.09 33.52
Os06t0607000-01 Rice plasma membrane 31.97 32.37
Os07t0240200-01 Rice endoplasmic reticulum, extracellular, plasma membrane 31.35 30.54
Os04t0682050-01 Rice plasma membrane 7.38 13.64
Os04t0681900-02 Rice endoplasmic reticulum 5.74 8.33
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80EntrezGene:4330874MapMan:50.3.2EMBL:AK058571ProteinID:BAD16854.1
ProteinID:BAD16859.1ProteinID:BAF10174.1ProteinID:BAS81124.1ProteinID:EEE57879.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016787GO:GO:0016798GO:GO:0030246
GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:Os02g0771700EnsemblPlants:Os02t0771700-01
PFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF102UniProt:Q6ZHG1
SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000035AD23InterPro:X8RefSeq:XP_015625926.1
SEG:seg:::::
Description
beta-1, 3-glucanase 9Glycoside hydrolase, family 17 protein. (Os02t0771700-01)
Coordinates
chr2:-:32567078..32570042
Molecular Weight (calculated)
50891.6 Da
IEP (calculated)
8.291
GRAVY (calculated)
0.020
Length
488 amino acids
Sequence
(BLAST)
001: MALPGRLRAL ILAVALPLLF LSASEAGTVG INYGRVANDL PNPAAVVQLM KQQGIAQVKL YDTEPTVLRA LANTGIKVVV ALPNEQLLAA ASRPSYALAW
101: VRRNVAAYYP ATQIQGIAVG NEVFASAKNL TAQLVPAMTN VHAALARLSL DKPVKVSSPI ALTALAGSYP PSAGVFREDL AQAVMKPMLD FLAQTGSYLM
201: VNAYPFFAYS GNADVISLDY ALFRPNAGVL DSGSGLKYYS LLDAQLDAVF TAVSKLGNYN AVRVVVSETG WPSKGDAKET GAAAANAAAY NGNLVRRVLS
301: GNAGTPRRPD ADMDVYLFAL FNENQKPGPT SERNYGVFYP NQQKVYDVEF VLGGNSAGGG GSSGKDNGGL GWQDNGGVNA GNAPAGAGGG VKATSTGEAW
401: CVANAMAGEE RLQKALDYAC GPGGADCKAI QPGAACFEPN TMVAHASYAF NDYYQRKGRT IGTCDFAGAA YVVNQAPKMG KCELPSTV
Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)
001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.