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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 26072143
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G142000.1 Wheat golgi 80.51 82.25
TraesCS4A01G175900.1 Wheat extracellular 80.08 82.0
TraesCS4D01G136800.1 Wheat cytosol, extracellular, plastid, vacuole 77.97 81.96
HORVU4Hr1G027740.1 Barley vacuole 79.24 74.95
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 73.94 74.73
Zm00001d004768_P001 Maize extracellular 70.76 73.57
VIT_13s0019g01180.t01 Wine grape extracellular, vacuole 50.0 52.8
KRH01668 Soybean extracellular 49.58 51.32
CDX76097 Canola extracellular 48.09 50.33
Bra014747.1-P Field mustard extracellular 47.88 50.11
Bra007161.1-P Field mustard extracellular 48.09 50.11
CDY40218 Canola extracellular 48.09 50.11
CDY02936 Canola extracellular 47.67 49.78
CDY41234 Canola extracellular 47.88 49.67
AT3G55430.1 Thale cress extracellular 47.03 49.44
CDY62387 Canola extracellular 46.61 49.0
CDY40219 Canola extracellular 46.61 48.89
CDY53692 Canola extracellular 46.4 48.78
Solyc07g005330.2.1 Tomato extracellular 47.25 48.58
Bra003212.1-P Field mustard extracellular 46.19 48.55
Bra007162.1-P Field mustard extracellular 46.19 48.44
CDY41232 Canola extracellular 45.76 47.89
PGSC0003DMT400008245 Potato vacuole 46.82 47.84
Os04t0681950-00 Rice vacuole 43.86 45.9
PGSC0003DMT400060499 Potato extracellular 45.34 42.46
Solyc05g054440.2.1 Tomato unclear 47.25 42.4
Bra005028.1-P Field mustard extracellular 39.83 41.96
Os03t0669300-02 Rice endoplasmic reticulum 40.89 41.59
CDY20461 Canola extracellular 39.41 41.33
CDY53600 Canola extracellular 39.19 41.11
Os07t0240200-01 Rice endoplasmic reticulum, extracellular, plasma membrane 42.37 39.92
Os03t0227400-01 Rice plasma membrane 29.24 37.81
Os02t0771700-01 Rice extracellular 37.5 36.27
Os06t0131500-01 Rice plastid 33.9 35.63
Os02t0532900-01 Rice endoplasmic reticulum, extracellular 29.45 35.55
Os10t0160100-01 Rice extracellular, vacuole 31.57 35.48
Os04t0412300-01 Rice plasma membrane, plastid, vacuole 30.51 35.38
AT2G39640.1 Thale cress endoplasmic reticulum, extracellular, vacuole 40.47 34.79
Os01t0739700-01 Rice plasma membrane 35.81 34.28
Os01t0860800-01 Rice extracellular 28.81 34.17
Os03t0722500-01 Rice extracellular, plasma membrane, vacuole 31.99 33.71
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 33.26 33.69
Os03t0246100-01 Rice extracellular, vacuole 30.3 33.26
Os09t0502200-01 Rice extracellular 33.26 32.71
Os03t0845600-01 Rice extracellular, vacuole 32.63 32.49
Os03t0221500-01 Rice extracellular, plasma membrane, vacuole 33.05 30.95
Os07t0538000-01 Rice extracellular 35.38 29.93
Os02t0200300-02 Rice golgi, mitochondrion, vacuole 26.69 29.72
Os07t0577300-01 Rice extracellular 30.51 28.92
Os08t0244500-00 Rice extracellular 33.69 28.24
Os06t0531000-00 Rice vacuole 29.24 27.82
Os07t0539300-01 Rice extracellular 33.9 27.73
Os07t0539100-01 Rice extracellular 32.2 27.49
Os07t0510200-01 Rice plasma membrane 30.72 26.85
Os06t0607000-01 Rice plasma membrane 26.69 26.14
Os07t0539400-00 Rice extracellular, plastid, vacuole 28.81 26.1
Os07t0539900-01 Rice extracellular 31.14 24.42
Os04t0682050-01 Rice plasma membrane 7.42 13.26
Os04t0681900-02 Rice endoplasmic reticulum 6.78 9.52
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:1.20.58.1040Gene3D:3.20.20.80EntrezGene:4351214MapMan:50.3.2ProteinID:AAX95270.1
ProteinID:ABA95507.2EMBL:AK059271ProteinID:BAF28908.2ProteinID:BAT15403.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016787GO:GO:0016798GO:GO:0030246
GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:Os11g0704600EnsemblPlants:Os11t0704600-01
PFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF62UniProt:Q53MA7
SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000050945AInterPro:X8RefSeq:XP_015617567.1
SEG:seg:::::
Description
Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39). (Os11t0704600-01);Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39). (Os11t0704600-02);Glycoside hydrolase, family 17 protein. (Os11t0704600-03)
Coordinates
chr11:-:28838890..28842804
Molecular Weight (calculated)
50840.3 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.208
Length
472 amino acids
Sequence
(BLAST)
001: MRNLHPPMMK MLLAALVVVA AASFRAAEAA LPSMAVGVNY GANADNLPPP KDVAAFLAAH TTIDRVKLFD ANPAFISAFA NTPISLAVSL PNSDLPSLAD
101: KQTGLDTARA WVRANLSPYV PATNVTLLLA GNEILLSPDP NLVLSLLPAM RRLAQALRLE GLTGVRVTTP HYLGILAPSD GIPSNARFRP GYDTKLFPPM
201: LQFHRDTGSP FMVNPYPYFS YNNQTLDYAL FRPNRGVYDP NTKLNYTSMF DAQMDAIYTA MKRLGYGDVD IAVGEAGWPT QADPGQVGVG VEEARDFNEG
301: MLRVVSSGKG TPLMPNRKFE TYIFSLFDEN QKPGPIAEKH FGILNPDFTP IYDLGLLRQS SDSGAPNPSP NPSPNPSPKP APSGGGKWCV PKAGASDTDL
401: QNNINYACGY VDCKPIQSGG ACFDPNNVQS HAAFVMNAFY QANGRHDYDC DFKGTGAVTS NDPSYGSCKY VS
Best Arabidopsis Sequence Match ( AT5G24318.1 )
(BLAST)
001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSY GNCEYQAN
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.