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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • mitochondrion 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:mitochondrion, vacuole
iPSORT:mitochondrion
MultiLoc:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G142000.1 Wheat golgi 89.38 96.54
TraesCS4A01G175900.1 Wheat extracellular 88.58 95.88
TraesCS4D01G136800.1 Wheat cytosol, extracellular, plastid, vacuole 85.77 95.32
Os11t0704600-01 Rice extracellular 74.95 79.24
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 67.94 72.59
Zm00001d004768_P001 Maize extracellular 65.13 71.59
AT3G55430.1 Thale cress extracellular 46.49 51.67
CDY02936 Canola extracellular 46.29 51.11
VIT_13s0019g01180.t01 Wine grape extracellular, vacuole 45.69 51.01
CDY62387 Canola extracellular 45.89 51.0
CDX76097 Canola extracellular 45.89 50.78
CDY41234 Canola extracellular 46.29 50.77
KRH01668 Soybean extracellular 46.29 50.66
CDY53692 Canola extracellular 45.49 50.56
Bra014747.1-P Field mustard extracellular 45.69 50.55
Bra007161.1-P Field mustard extracellular 45.89 50.55
Bra003212.1-P Field mustard extracellular 45.29 50.33
CDY40218 Canola extracellular 45.69 50.33
CDY40219 Canola extracellular 44.89 49.78
CDY41232 Canola extracellular 44.69 49.45
Bra007162.1-P Field mustard extracellular 44.49 49.33
Solyc07g005330.2.1 Tomato extracellular 42.28 45.97
PGSC0003DMT400008245 Potato vacuole 42.08 45.45
HORVU2Hr1G102010.1 Barley golgi, mitochondrion, vacuole 31.26 44.32
CDY20461 Canola extracellular 39.68 44.0
Bra005028.1-P Field mustard extracellular 39.48 43.97
CDY53600 Canola extracellular 39.48 43.78
PGSC0003DMT400060499 Potato extracellular 41.08 40.67
Solyc05g054440.2.1 Tomato unclear 42.08 39.92
HORVU5Hr1G083710.1 Barley golgi, mitochondrion, vacuole 38.48 38.17
HORVU4Hr1G003090.3 Barley extracellular, vacuole 39.68 36.94
HORVU3Hr1G070400.1 Barley extracellular, vacuole 33.87 36.9
HORVU4Hr1G008950.1 Barley vacuole 30.46 36.45
HORVU1Hr1G010910.2 Barley extracellular, vacuole 30.06 36.41
HORVU4Hr1G065340.1 Barley extracellular, vacuole 30.86 35.73
HORVU3Hr1G067280.5 Barley plasma membrane 29.86 34.98
HORVU5Hr1G075510.2 Barley plasma membrane, vacuole 33.87 34.63
AT2G39640.1 Thale cress endoplasmic reticulum, extracellular, vacuole 38.08 34.61
HORVU1Hr1G011210.1 Barley vacuole 29.26 33.95
HORVU3Hr1G084170.1 Barley extracellular, vacuole 27.86 33.82
HORVU1Hr1G073820.3 Barley mitochondrion, peroxisome, plastid, vacuole 30.46 33.41
HORVU0Hr1G021950.4 Barley golgi, vacuole 26.45 33.0
HORVU7Hr1G012550.1 Barley vacuole 29.46 32.89
HORVU3Hr1G070440.12 Barley plastid 34.27 32.88
HORVU4Hr1G063240.7 Barley golgi, vacuole 28.46 32.79
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 31.46 32.64
HORVU7Hr1G091100.3 Barley vacuole 35.67 31.34
HORVU7Hr1G079650.7 Barley extracellular, vacuole 27.45 31.21
HORVU2Hr1G044460.2 Barley vacuole 33.47 30.14
HORVU6Hr1G032490.1 Barley plastid 26.85 30.04
HORVU5Hr1G048630.2 Barley plasma membrane, vacuole 29.86 30.04
HORVU2Hr1G036980.5 Barley plasma membrane 29.06 29.47
HORVU4Hr1G067180.3 Barley extracellular, vacuole 29.26 28.97
HORVU1Hr1G092310.2 Barley extracellular 32.67 28.85
HORVU2Hr1G044450.4 Barley extracellular, vacuole 32.06 28.52
HORVU2Hr1G072890.1 Barley mitochondrion 30.26 28.28
HORVU1Hr1G092240.3 Barley extracellular, vacuole 32.26 27.43
HORVU6Hr1G079630.2 Barley mitochondrion, plastid, vacuole 29.66 27.36
HORVU5Hr1G095380.1 Barley cytosol 16.83 26.75
HORVU2Hr1G047410.3 Barley vacuole 15.63 12.94
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:1.20.58.1040Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A287NNM3GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
EnsemblPlantsGene:HORVU4Hr1G027740EnsemblPlants:HORVU4Hr1G027740.1PFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227
PANTHER:PTHR32227:SF142SMART:SM00768SUPFAM:SSF51445TMHMM:TMhelixUniParc:UPI000B475582InterPro:X8
SEG:seg:::::
Description
No Description!
Coordinates
chrchr4H:-:169890553..169896583
Molecular Weight (calculated)
53150.1 Da
IEP (calculated)
7.217
GRAVY (calculated)
-0.077
Length
499 amino acids
Sequence
(BLAST)
001: GNHHATFVRS SPLYSAPGVV FERNPRCHFK SDPQSTTLHL AMPLLLLLLM LLAAGAAGAE SATPSLPIGV NYGANADNLP SPTSVATFLA TKTTINRVKL
101: FDANPVFISA FAGTPISLVV SLPNSALPAL ADKATGLDAA RSWIRANLSP YVPATNVTLL LAGNEILLST DTNLILSLLP AMRRLAQALK AEGLTGVRVT
201: TPHYLGILAP SDGIPSNATF RAGYNTKLFP ALLQFHRDTG SPFMVNPYPY FSYRPETLNY ALFRPNSGIY DPATKLNYTS MFDAQMDAIY TAMKKLGYGD
301: VDIAVGEAGW PTQAEPGQIG VGVQEARDFN EGMIRVCSSG KGTPLMPNRT FETYLFSLFD ENQKPGPIAE RHFGLFNPDF TPVYDLGLLR DGSSLAPTPS
401: PNPSPKPSPS GGGKWCVAKD GANGTDLQNN INYACGFVDC KAIQSGGACF SPNSLQSHAS YVMNAYYQAN GHTDSACDFK GTGVVTSSDP SYGGCKYVS
Best Arabidopsis Sequence Match ( AT3G55430.1 )
(BLAST)
001: MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY
Arabidopsis Description
Beta-1, 3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2T6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.