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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 3
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
TargetP:secretory
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G277100.2 Wheat vacuole 94.1 87.25
HORVU3Hr1G070440.12 Barley plastid 97.38 85.77
TraesCS3D01G277300.4 Wheat vacuole 94.32 81.51
TraesCS3B01G311300.2 Wheat vacuole 94.32 81.36
Os01t0739700-01 Rice plasma membrane 87.34 81.14
EES01451 Sorghum extracellular, plasma membrane, vacuole 86.46 79.68
Zm00001d043524_P001 Maize plasma membrane 86.03 79.44
GSMUA_Achr4P02650_001 Banana extracellular, vacuole 66.59 70.77
VIT_11s0016g02960.t01 Wine grape extracellular, vacuole 71.62 66.4
KRH41480 Soybean extracellular, plasma membrane, vacuole 71.83 66.06
KRH60198 Soybean extracellular, plasma membrane, vacuole 71.4 65.53
Solyc12g008580.1.1 Tomato extracellular 70.52 65.12
PGSC0003DMT400000943 Potato extracellular, vacuole 70.52 65.12
CDY64970 Canola extracellular, plasma membrane, vacuole 67.47 61.43
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 67.25 61.23
Bra002805.1-P Field mustard nucleus, plastid, vacuole 65.72 61.18
AT5G56590.1 Thale cress extracellular, plasma membrane, vacuole 67.47 61.07
HORVU2Hr1G102010.1 Barley golgi, mitochondrion, vacuole 30.57 39.77
HORVU2Hr1G036980.5 Barley plasma membrane 39.08 36.38
HORVU3Hr1G084170.1 Barley extracellular, vacuole 32.53 36.25
HORVU5Hr1G048630.2 Barley plasma membrane, vacuole 38.65 35.69
HORVU4Hr1G067180.3 Barley extracellular, vacuole 39.08 35.52
HORVU0Hr1G021950.4 Barley golgi, vacuole 30.13 34.5
HORVU4Hr1G063240.7 Barley golgi, vacuole 32.31 34.18
HORVU1Hr1G010910.2 Barley extracellular, vacuole 30.57 33.98
HORVU4Hr1G027740.1 Barley vacuole 36.9 33.87
HORVU7Hr1G079650.7 Barley extracellular, vacuole 31.44 32.8
HORVU3Hr1G067280.5 Barley plasma membrane 30.35 32.63
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 34.06 32.43
HORVU1Hr1G011210.1 Barley vacuole 30.13 32.09
HORVU7Hr1G012550.1 Barley vacuole 31.22 31.99
HORVU5Hr1G075510.2 Barley plasma membrane, vacuole 34.06 31.97
HORVU2Hr1G044460.2 Barley vacuole 38.65 31.95
HORVU4Hr1G065340.1 Barley extracellular, vacuole 29.48 31.32
HORVU1Hr1G073820.3 Barley mitochondrion, peroxisome, plastid, vacuole 30.79 30.99
HORVU4Hr1G003090.3 Barley extracellular, vacuole 36.03 30.78
HORVU4Hr1G008950.1 Barley vacuole 27.95 30.7
HORVU6Hr1G032490.1 Barley plastid 29.48 30.27
HORVU7Hr1G091100.3 Barley vacuole 37.34 30.11
HORVU2Hr1G044450.4 Barley extracellular, vacuole 36.68 29.95
HORVU1Hr1G092310.2 Barley extracellular 36.68 29.73
HORVU6Hr1G079630.2 Barley mitochondrion, plastid, vacuole 33.62 28.47
HORVU1Hr1G092240.3 Barley extracellular, vacuole 35.81 27.94
HORVU5Hr1G083710.1 Barley golgi, mitochondrion, vacuole 30.35 27.63
HORVU5Hr1G095380.1 Barley cytosol 18.78 27.39
HORVU2Hr1G072890.1 Barley mitochondrion 31.0 26.59
HORVU2Hr1G047410.3 Barley vacuole 22.93 17.41
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A287LJC4GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:HORVU3Hr1G070400EnsemblPlants:HORVU3Hr1G070400.1PFAM:PF00332PFAM:PF07983PANTHER:PTHR32227
PANTHER:PTHR32227:SF88SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000B473707InterPro:X8
SEG:seg:::::
Description
No Description!
Coordinates
chrchr3H:-:532582116..532584082
Molecular Weight (calculated)
49755.7 Da
IEP (calculated)
6.342
GRAVY (calculated)
-0.115
Length
458 amino acids
Sequence
(BLAST)
001: RRHAAAFSAF LFLLLIGHCH GGKTGICYGR NADDLPGPDK VAQLIQQQSI KYVRIYDANV DVIKAFANTS VELMVGVPNA DLLAFSQYQS NVDTWLKNSI
101: LPYYPATAIT YITVGAEITE STINVSSLVV PAMRNVQAAL KKVGLHKKIT ISSTHSLGVL SRSFPPSAGA FNSSYAHFLK PMLEFLVENQ APFMVDLYPY
201: YAYQNSPSNV SLNYALFSPQ SQGVIDPNTG LVYTNMFDAQ VDSIFFALMA LNFKTLKIMI TETGWPHKGA AKETGATPDN AQTYNTNLIR HVVNDSGTPA
301: KPGEEIDVYI FSLFNENRKP GIESERNWGL FSPDQSSIYS VDWTGRGNVD IMTGGNLTSS NGTWCVASTN VSETALQNGL NWACGPGNVD CSAIQPSQPC
401: YQPDTLVSHA SYAFNSYYQQ NGATDVACGF GGAGMRTTKD PSKYHVSLTE IATGSPLI
Best Arabidopsis Sequence Match ( AT2G01630.3 )
(BLAST)
001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSM
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU91]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.