Factsheet for AT5G56590.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
vacuole 5
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32869	Canola	endoplasmic reticulum, extracellular, plasma membrane	90.12	90.66
CDY64970	Canola	extracellular, plasma membrane, vacuole	89.33	89.86
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	86.56	89.02
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	71.74	73.48
KRH41480	Soybean	extracellular, plasma membrane, vacuole	71.54	72.69
KRH60198	Soybean	extracellular, plasma membrane, vacuole	70.75	71.74
Solyc12g008580.1.1	Tomato	extracellular	68.58	69.96
PGSC0003DMT400000943	Potato	extracellular, vacuole	68.38	69.76
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	61.07	67.47
TraesCS3A01G277100.2	Wheat	vacuole	63.64	65.18
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	55.14	64.73
EES01451	Sorghum	extracellular, plasma membrane, vacuole	63.44	64.59
Zm00001d043524_P001	Maize	plasma membrane	63.24	64.52
Os01t0739700-01	Rice	plasma membrane	62.45	64.1
TraesCS3D01G277300.4	Wheat	vacuole	63.64	60.75
TraesCS3B01G311300.2	Wheat	vacuole	63.64	60.64
HORVU3Hr1G070440.12	Barley	plastid	62.06	60.38
AT4G29360.2	Thale cress	vacuole	58.5	54.41
AT3G46570.1	Thale cress	vacuole	29.45	41.85
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	34.98	38.56
AT2G05790.1	Thale cress	extracellular, vacuole	35.77	38.35
AT2G27500.1	Thale cress	vacuole	29.25	37.76
AT2G01630.1	Thale cress	extracellular	37.35	37.72
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	34.59	37.63
AT3G07320.1	Thale cress	extracellular, vacuole	33.4	36.74
AT3G55430.1	Thale cress	extracellular	32.02	36.08
AT1G66250.1	Thale cress	vacuole	35.97	36.04
AT1G30080.1	Thale cress	vacuole	29.05	36.03
AT1G32860.1	Thale cress	extracellular, plasma membrane, vacuole	30.24	35.92
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	35.57	35.71
AT3G13560.4	Thale cress	plasma membrane	35.57	35.64
AT4G18340.1	Thale cress	vacuole	27.87	35.52
AT3G15800.1	Thale cress	golgi, plastid, vacuole	27.47	34.84
AT1G11820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	35.18	34.83
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	29.84	34.47
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	26.28	34.28
AT2G16230.1	Thale cress	vacuole	33.99	34.19
AT3G23770.1	Thale cress	extracellular	31.82	33.82
AT5G42100.1	Thale cress	extracellular, vacuole	28.26	33.65
AT5G24318.1	Thale cress	extracellular	29.84	32.97
AT4G14080.1	Thale cress	vacuole	30.04	31.8
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	28.26	26.05

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EntrezGene:835760	ProteinID:AED96784.1	ArrayExpress:AT5G56590
EnsemblPlantsGene:AT5G56590	RefSeq:AT5G56590	TAIR:AT5G56590	RefSeq:AT5G56590-TAIR-G	EnsemblPlants:AT5G56590.1	TAIR:AT5G56590.1
EMBL:AY075591	EMBL:AY133637	Unigene:At.43021	ProteinID:BAB09876.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	GO:GO:0030247	GO:GO:0030312	GO:GO:0031225	GO:GO:0042973	GO:GO:0046658
GO:GO:0071555	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	RefSeq:NP_200470.1	PFAM:PF00332	PFAM:PF07983
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88	UniProt:Q9FJU9	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0000048C82	InterPro:X8	SEG:seg	:

Description

Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]

Coordinates

chr5:+:22907264..22909707

Molecular Weight (calculated)

55606.8 Da

IEP (calculated)

7.865

GRAVY (calculated)

-0.158

Length

506 amino acids

Sequence
(BLAST)

001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.