Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- endoplasmic reticulum 5
- plasma membrane 4
- vacuole 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58676 | Canola | extracellular, vacuole | 91.49 | 91.67 |
| CDY16440 | Canola | extracellular | 91.29 | 91.47 |
| Bra039757.1-P | Field mustard | extracellular, vacuole | 91.09 | 91.09 |
| VIT_14s0006g00520.t01 | Wine grape | extracellular, plasma membrane, vacuole | 70.69 | 72.27 |
| KRH17336 | Soybean | plasma membrane | 70.3 | 71.29 |
| KRG97940 | Soybean | extracellular, plasma membrane, vacuole | 68.51 | 69.48 |
| KRH30935 | Soybean | extracellular, plasma membrane, vacuole | 68.51 | 69.48 |
| KRH72984 | Soybean | vacuole | 68.32 | 68.32 |
| Solyc08g005000.2.1 | Tomato | extracellular | 58.02 | 66.89 |
| Os03t0221500-01 | Rice | extracellular, plasma membrane, vacuole | 64.95 | 65.08 |
| AT2G01630.1 | Thale cress | extracellular | 63.96 | 64.47 |
| TraesCS4D01G241900.1 | Wheat | extracellular | 63.56 | 64.2 |
| TraesCS4B01G242300.1 | Wheat | extracellular | 63.56 | 64.2 |
| Zm00001d048055_P001 | Maize | plasma membrane | 62.38 | 62.87 |
| Zm00001d028243_P001 | Maize | plasma membrane | 62.18 | 62.55 |
| EER95256 | Sorghum | extracellular, plasma membrane, vacuole | 62.18 | 62.55 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 63.76 | 62.04 |
| TraesCS4A01G064900.2 | Wheat | extracellular, plasma membrane, vacuole | 63.56 | 60.8 |
| HORVU4Hr1G067180.3 | Barley | extracellular, vacuole | 60.59 | 60.71 |
| PGSC0003DMT400040463 | Potato | mitochondrion, vacuole | 62.38 | 55.75 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 52.08 | 51.47 |
| GSMUA_Achr2P21600_001 | Banana | mitochondrion, nucleus, plasma membrane | 65.15 | 47.82 |
| AT3G13560.4 | Thale cress | plasma membrane | 42.97 | 42.97 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 36.44 | 38.98 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 35.25 | 38.78 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 34.85 | 37.85 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.04 | 35.97 |
| AT5G24318.1 | Thale cress | extracellular | 32.28 | 35.59 |
| AT4G29360.2 | Thale cress | vacuole | 37.23 | 34.56 |
| AT3G23770.1 | Thale cress | extracellular | 32.28 | 34.24 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 31.09 | 34.13 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 33.47 | 33.53 |
| AT3G46570.1 | Thale cress | vacuole | 23.56 | 33.43 |
| AT2G16230.1 | Thale cress | vacuole | 33.27 | 33.4 |
| AT4G18340.1 | Thale cress | vacuole | 25.94 | 33.0 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 25.15 | 32.73 |
| AT3G55430.1 | Thale cress | extracellular | 28.91 | 32.52 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 25.35 | 32.08 |
| AT1G30080.1 | Thale cress | vacuole | 25.74 | 31.86 |
| AT4G14080.1 | Thale cress | vacuole | 29.5 | 31.17 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 25.94 | 30.82 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 25.94 | 30.75 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 26.53 | 30.59 |
| AT2G27500.1 | Thale cress | vacuole | 23.56 | 30.36 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.93 | 24.77 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:842942 | ProteinID:AAG51762.1 | ProteinID:AEE34485.1 |
| ArrayExpress:AT1G66250 | EnsemblPlantsGene:AT1G66250 | RefSeq:AT1G66250 | TAIR:AT1G66250 | RefSeq:AT1G66250-TAIR-G | EnsemblPlants:AT1G66250.1 |
| TAIR:AT1G66250.1 | EMBL:BX814184 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 |
| GO:GO:0030247 | GO:GO:0031225 | GO:GO:0042973 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| RefSeq:NP_176799.2 | PFAM:PF00332 | PFAM:PF07983 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF52 |
| UniProt:Q9C7U5 | SMART:SM00768 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI000034F4FB | InterPro:X8 |
| SEG:seg | : | : | : | : | : |
Description
Glucan endo-1,3-beta-glucosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7U5]
Coordinates
chr1:+:24692799..24695660
Molecular Weight (calculated)
54209.4 Da
IEP (calculated)
5.574
GRAVY (calculated)
0.042
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLHLLLL SLSLLVLASA SPSPPADEGS YIGVNIGTDL SDMPHPTQVV ALLKAQEIRH IRLYNADPGL LIALANTGIK VIISIPNDQL LGIGQSNSTA
101: ANWVKRNVIA HYPATMITAV SVGSEVLTSL SNAAPVLVSA IKNVHAALLS ANLDKLIKVS TPLSTSLILD PFPPSQAFFN RSLNAVIVPL LSFLQSTNSY
201: LMVNVYPYID YMQSNGVIPL DYALFKPIPP NKEAVDANTL VRYSNAFDAM VDATYFAMAF LNFTNIPVLV TESGWPSKGE TNEPDATLDN ANTYNSNLIR
301: HVLNKTGTPK RPGIAVSTYI YELYNEDTKA GLSEKNWGLF NANGEPVYVL RLTNSGSVLA NDTTNQTYCT AREGADTKML QAALDWACGP GKIDCSPIKQ
401: GETCYEPDNV VAHANYAFDT YYHQTGNNPD ACNFNGVASI TTTDPSHGTC VFAGSRGNGR NGTSVNITAP SANSTTSSGI RSDLYYSRGI WSILTVMILN
501: VANIL
101: ANWVKRNVIA HYPATMITAV SVGSEVLTSL SNAAPVLVSA IKNVHAALLS ANLDKLIKVS TPLSTSLILD PFPPSQAFFN RSLNAVIVPL LSFLQSTNSY
201: LMVNVYPYID YMQSNGVIPL DYALFKPIPP NKEAVDANTL VRYSNAFDAM VDATYFAMAF LNFTNIPVLV TESGWPSKGE TNEPDATLDN ANTYNSNLIR
301: HVLNKTGTPK RPGIAVSTYI YELYNEDTKA GLSEKNWGLF NANGEPVYVL RLTNSGSVLA NDTTNQTYCT AREGADTKML QAALDWACGP GKIDCSPIKQ
401: GETCYEPDNV VAHANYAFDT YYHQTGNNPD ACNFNGVASI TTTDPSHGTC VFAGSRGNGR NGTSVNITAP SANSTTSSGI RSDLYYSRGI WSILTVMILN
501: VANIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.