Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89415 | Soybean | extracellular, vacuole | 43.26 | 42.9 |
| AT3G55430.1 | Thale cress | extracellular | 53.09 | 42.09 |
| AT5G24318.1 | Thale cress | extracellular | 52.53 | 40.83 |
| AT2G27500.1 | Thale cress | vacuole | 39.33 | 35.71 |
| AT1G30080.1 | Thale cress | vacuole | 40.17 | 35.05 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 39.04 | 34.84 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 37.92 | 34.79 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 40.45 | 33.8 |
| AT4G18340.1 | Thale cress | vacuole | 37.08 | 33.25 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 39.33 | 32.94 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 40.45 | 32.88 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 43.26 | 30.56 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 40.45 | 30.51 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 39.33 | 30.43 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 39.61 | 30.32 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 39.04 | 30.28 |
| AT2G16230.1 | Thale cress | vacuole | 41.85 | 29.62 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 41.85 | 29.45 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.66 | 28.96 |
| AT3G23770.1 | Thale cress | extracellular | 38.48 | 28.78 |
| AT4G14080.1 | Thale cress | vacuole | 38.2 | 28.45 |
| AT4G29360.2 | Thale cress | vacuole | 41.85 | 27.39 |
| AT2G01630.1 | Thale cress | extracellular | 37.36 | 26.55 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.24 | 25.24 |
| AT3G13560.4 | Thale cress | plasma membrane | 34.27 | 24.16 |
| AT1G66250.1 | Thale cress | vacuole | 33.43 | 23.56 |
| Os04t0682050-01 | Rice | plasma membrane | 10.39 | 14.02 |
| Os04t0681900-02 | Rice | endoplasmic reticulum | 0.84 | 0.89 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:823810 | ProteinID:AEE78173.1 | ArrayExpress:AT3G46570 |
| EnsemblPlantsGene:AT3G46570 | RefSeq:AT3G46570 | TAIR:AT3G46570 | RefSeq:AT3G46570-TAIR-G | EnsemblPlants:AT3G46570.1 | TAIR:AT3G46570.1 |
| Unigene:At.65255 | ProteinID:CAB62327.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 |
| InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_190241.1 | PFAM:PF00332 | PO:PO:0000191 | ScanProsite:PS00587 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF62 | UniProt:Q9SNC1 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00000487F5 | : | : | : | : | : |
Description
Glucosidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SNC1]
Coordinates
chr3:-:17145797..17146867
Molecular Weight (calculated)
39192.2 Da
IEP (calculated)
7.939
GRAVY (calculated)
0.118
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGSRVVHQL YFLILTLILP FSAAYQVGVN YGTVANNLPP PHQVVNFIKT KTIINHVKIF DTNHDILAAF SGITGISLTV TVPNSDIISL SKLSNARSWL
101: SDNLLPFLLT TSIRYIAVGN EVVATSDKTL ITHLLPAMET LTLALHLANV SRILVSTPHS LGILSGSSEP PSSGKFRKGY DKAIFSPILD FHNRTKSPFM
201: VNPYPYFGFG PETLNYALFN TNDVVYVDPV TKLNYTNMFD AQLDAVYSAM KRFGYGDVDI VVAETGWPSA GEPNQTGVGL DYAAAYNGNL IKHVNSGKGT
301: PLMPNRVFET YVFSLFNENL KSSVSEQNFG LFKPDFTPVY DVGIMKTNKV YTLQLL
101: SDNLLPFLLT TSIRYIAVGN EVVATSDKTL ITHLLPAMET LTLALHLANV SRILVSTPHS LGILSGSSEP PSSGKFRKGY DKAIFSPILD FHNRTKSPFM
201: VNPYPYFGFG PETLNYALFN TNDVVYVDPV TKLNYTNMFD AQLDAVYSAM KRFGYGDVDI VVAETGWPSA GEPNQTGVGL DYAAAYNGNL IKHVNSGKGT
301: PLMPNRVFET YVFSLFNENL KSSVSEQNFG LFKPDFTPVY DVGIMKTNKV YTLQLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.