Factsheet for AT4G18340.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
plastid 1
vacuole 7
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90405	Canola	vacuole	91.18	91.18
CDY01532	Canola	vacuole	91.18	91.18
CDX99476	Canola	vacuole	91.94	91.02
Bra012604.1-P	Field mustard	vacuole	90.93	90.93
CDX78840	Canola	vacuole	91.69	90.77
Bra013297.1-P	Field mustard	vacuole	91.44	90.52
CDX76528	Canola	extracellular, vacuole	87.41	87.63
CDY34065	Canola	extracellular, vacuole	86.9	85.4
AT1G30080.1	Thale cress	vacuole	62.22	60.54
KRG89350	Soybean	extracellular, vacuole	59.95	59.5
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	59.45	59.15
KRH11184	Soybean	endoplasmic reticulum, extracellular, vacuole	58.94	58.79
KRH21069	Soybean	vacuole	58.94	58.65
KRH50394	Soybean	extracellular, vacuole	60.45	55.17
EER88444	Sorghum	extracellular, vacuole	51.64	50.25
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	51.13	50.12
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	50.88	49.63
TraesCS7B01G233500.1	Wheat	extracellular	50.63	49.63
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	50.38	49.38
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	49.62	44.87
AT2G27500.1	Thale cress	vacuole	43.58	44.13
Os06t0531000-00	Rice	vacuole	51.39	41.13
AT1G32860.1	Thale cress	extracellular, plasma membrane, vacuole	43.07	40.14
AT3G15800.1	Thale cress	golgi, plastid, vacuole	40.3	40.1
AT5G42100.1	Thale cress	extracellular, vacuole	40.81	38.12
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	36.27	37.11
AT3G46570.1	Thale cress	vacuole	33.25	37.08
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	40.3	34.86
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	36.78	33.33
AT2G05790.1	Thale cress	extracellular, vacuole	39.29	33.05
AT5G24318.1	Thale cress	extracellular	37.03	32.1
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	37.28	31.83
AT3G55430.1	Thale cress	extracellular	33.75	29.84
AT3G07320.1	Thale cress	extracellular, vacuole	34.01	29.35
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	36.78	28.97
AT2G16230.1	Thale cress	vacuole	36.27	28.63
AT3G23770.1	Thale cress	extracellular	33.5	27.94
AT5G56590.1	Thale cress	extracellular, plasma membrane, vacuole	35.52	27.87
AT4G14080.1	Thale cress	vacuole	33.25	27.62
AT2G01630.1	Thale cress	extracellular	34.26	27.15
AT3G13560.4	Thale cress	plasma membrane	33.75	26.53
AT4G29360.2	Thale cress	vacuole	36.02	26.29
AT1G66250.1	Thale cress	vacuole	33.0	25.94
AT1G11820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	29.97	23.29
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	31.49	22.77

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EntrezGene:827561	UniProt:A0A178V5Z7	ProteinID:AEE84029.1
ArrayExpress:AT4G18340	EnsemblPlantsGene:AT4G18340	RefSeq:AT4G18340	TAIR:AT4G18340	RefSeq:AT4G18340-TAIR-G	EnsemblPlants:AT4G18340.1
TAIR:AT4G18340.1	EMBL:AY120764	Unigene:At.32918	EMBL:BT001232	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	RefSeq:NP_193568.2	ProteinID:OAP01204.1	PFAM:PF00332
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR32227
PANTHER:PTHR32227:SF229	UniProt:Q8L837	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000AC2F8
SEG:seg	:	:	:	:	:

Description

Beta-1,3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L837]

Coordinates

chr4:-:10130050..10132192

Molecular Weight (calculated)

44164.0 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.046

Length

397 amino acids

Sequence
(BLAST)

001: MTSRTFTRHS SLIHVFLLLS LVFSGNILQT VTSLGINYGQ VGNNLPSPDK VINLLRSLRI TKTRIYDTNP QILSAFANSN IEIIVTIENQ VLPLLQDPQQ
101: ATQWVDSHIK PYVPATRITG IMVGNELFTD DDSSLIGYMM PAIINIHKAL VQLGLDRYIQ VSSPSSLAVL GESYPPSAGS FKPEVSSVMQ QLLDFLEATK
201: SPFWINAYPY FAYKDNPQEI PVDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDV GEIGASPVNA ATYNRNLMMR
301: QFAGEGTPAR RNARLDVYIF ALFNEDMKPG PTSEKNYGIF QPDGSLAYNL GFSTMSTTTA NSESVTYSSS ATKAKRSLEY WTILILAMVQ VVMLRLF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.