Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G18340.1 | KRH00319 | AT2G38310.1 | 19407142 |
AT4G18340.1 | KRH49452 | AT2G38310.1 | 19407142 |
AT4G18340.1 | KRH76014 | AT2G38310.1 | 19407142 |
AT4G18340.1 | KRH45453 | AT4G17870.1 | 19407142 |
AT4G18340.1 | KRH75621 | AT4G17870.1 | 19407142 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH11184 | Soybean | endoplasmic reticulum, extracellular, vacuole | 95.74 | 95.98 |
KRG89350 | Soybean | extracellular, vacuole | 73.43 | 73.25 |
VIT_10s0003g03690.t01 | Wine grape | extracellular | 65.91 | 70.13 |
KRH50394 | Soybean | extracellular, vacuole | 72.43 | 66.44 |
Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 62.91 | 62.91 |
Bra012604.1-P | Field mustard | vacuole | 59.15 | 59.45 |
CDX90405 | Canola | vacuole | 59.15 | 59.45 |
CDY01532 | Canola | vacuole | 58.65 | 58.94 |
AT4G18340.1 | Thale cress | vacuole | 58.65 | 58.94 |
CDX76528 | Canola | extracellular, vacuole | 58.15 | 58.59 |
CDX99476 | Canola | vacuole | 58.15 | 57.86 |
CDX78840 | Canola | vacuole | 58.15 | 57.86 |
CDY34065 | Canola | extracellular, vacuole | 58.4 | 57.67 |
Bra013297.1-P | Field mustard | vacuole | 57.64 | 57.36 |
TraesCS7B01G233500.1 | Wheat | extracellular | 53.88 | 53.09 |
TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 53.63 | 52.84 |
Zm00001d046134_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 53.88 | 52.83 |
TraesCS7A01G349200.1 | Wheat | endoplasmic reticulum, extracellular | 53.38 | 52.59 |
EER88444 | Sorghum | extracellular, vacuole | 52.63 | 51.47 |
HORVU7Hr1G079650.7 | Barley | extracellular, vacuole | 53.88 | 48.97 |
KRH22675 | Soybean | vacuole | 43.61 | 44.39 |
KRH25239 | Soybean | extracellular, plasma membrane, vacuole | 41.6 | 42.35 |
Os06t0531000-00 | Rice | vacuole | 52.38 | 42.14 |
KRH47445 | Soybean | extracellular, vacuole | 41.1 | 42.05 |
KRH30421 | Soybean | extracellular, plasma membrane, vacuole | 41.1 | 41.73 |
KRH44462 | Soybean | extracellular, vacuole | 40.6 | 41.65 |
KRH09724 | Soybean | extracellular, plasma membrane, vacuole | 39.6 | 40.93 |
KRH34248 | Soybean | extracellular, plasma membrane, vacuole | 42.36 | 40.82 |
KRH26646 | Soybean | extracellular, plasma membrane, vacuole | 43.36 | 40.52 |
KRH20124 | Soybean | golgi, vacuole | 36.34 | 37.37 |
KRH23581 | Soybean | extracellular, vacuole | 33.58 | 37.33 |
KRH52523 | Soybean | extracellular, plasma membrane, vacuole | 30.33 | 34.97 |
KRH51533 | Soybean | endoplasmic reticulum, extracellular, vacuole | 40.1 | 34.86 |
KRH24481 | Soybean | cytosol | 31.33 | 34.72 |
KRH60849 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.85 | 34.64 |
KRH03678 | Soybean | golgi, mitochondrion, plasma membrane, plastid, vacuole | 36.09 | 34.45 |
KRH14333 | Soybean | endoplasmic reticulum, extracellular | 39.1 | 33.84 |
KRH73795 | Soybean | extracellular, vacuole | 39.85 | 33.69 |
KRH73361 | Soybean | extracellular, vacuole | 39.85 | 33.69 |
KRH15221 | Soybean | extracellular | 40.85 | 33.68 |
KRH20365 | Soybean | extracellular, vacuole | 32.83 | 33.5 |
KRH14776 | Soybean | extracellular, vacuole | 39.6 | 33.12 |
KRH01668 | Soybean | extracellular | 34.34 | 30.04 |
KRH60198 | Soybean | extracellular, plasma membrane, vacuole | 37.09 | 29.66 |
KRH41480 | Soybean | extracellular, plasma membrane, vacuole | 36.59 | 29.32 |
KRH46623 | Soybean | nucleus | 33.08 | 28.27 |
KRG99621 | Soybean | nucleus | 32.83 | 28.05 |
KRG89415 | Soybean | extracellular, vacuole | 25.06 | 27.86 |
KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 32.83 | 26.31 |
KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 32.83 | 26.15 |
KRH17336 | Soybean | plasma membrane | 32.58 | 26.1 |
KRH08471 | Soybean | extracellular | 31.83 | 25.6 |
KRH58918 | Soybean | endoplasmic reticulum | 31.58 | 25.4 |
KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 31.58 | 25.4 |
KRH72984 | Soybean | vacuole | 32.08 | 25.35 |
KRH70129 | Soybean | cytosol | 31.08 | 25.31 |
KRH30935 | Soybean | extracellular, plasma membrane, vacuole | 30.83 | 24.7 |
KRG97940 | Soybean | extracellular, plasma membrane, vacuole | 30.83 | 24.7 |
KRH51109 | Soybean | vacuole | 32.08 | 24.47 |
KRH41666 | Soybean | plasma membrane | 30.58 | 24.45 |
KRH02051 | Soybean | mitochondrion, vacuole | 32.83 | 23.99 |
KRH11452 | Soybean | extracellular, vacuole | 18.8 | 22.32 |
KRH60366 | Soybean | extracellular | 30.83 | 21.32 |
Protein Annotations
KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EMBL:ACUP02008337 | EnsemblPlantsGene:GLYMA_13G218300 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 |
GO:GO:0030247 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:I1M1G0 | EnsemblPlants:KRH21069 |
ProteinID:KRH21069 | ProteinID:KRH21069.1 | ProteinID:KRH21070.1 | PFAM:PF00332 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF85 |
SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI000233C090 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:-:33167113..33169759
Molecular Weight (calculated)
44112.6 Da
IEP (calculated)
4.691
GRAVY (calculated)
0.026
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTFFRNLAF SYAFLAIFLS AGIGVFLGVE SFGINYGQVA NNLPQPDKVL ELLSTLNLTK TRIYDTNPQI LTSFSNSNIE IIVTVENEIL SQLDDPQQAL
101: QWVNSRIVPY LPETKITGVQ VGNEVFTDDD ITLIEHLVPA VVNIHNALAQ LGYSNIKVST PSSLAVLDQS YPPSAGSFKS EISGIMYQFL NFLSSSKSPF
201: WINAYPYFAY KDEPNGISLN YVMFNPNAGM VDPYTNLHYD NMLYAMVDAV SFAIAKMGFK GIEVRVSETG WPSKGDANEV GATPMNAATY NRNLLRRQMA
301: GEGTPLNPRM RLEVYLFALF NEDLKPGPTS ERNYGLFRPD ESMTYNVGLS ALATSSATTS SSSSISLASS GTKIKVTPWE YKSLVNWMFV FVLISTLYG
101: QWVNSRIVPY LPETKITGVQ VGNEVFTDDD ITLIEHLVPA VVNIHNALAQ LGYSNIKVST PSSLAVLDQS YPPSAGSFKS EISGIMYQFL NFLSSSKSPF
201: WINAYPYFAY KDEPNGISLN YVMFNPNAGM VDPYTNLHYD NMLYAMVDAV SFAIAKMGFK GIEVRVSETG WPSKGDANEV GATPMNAATY NRNLLRRQMA
301: GEGTPLNPRM RLEVYLFALF NEDLKPGPTS ERNYGLFRPD ESMTYNVGLS ALATSSATTS SSSSISLASS GTKIKVTPWE YKSLVNWMFV FVLISTLYG
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.