CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89350
KRH02667
KRH11184
KRH12454
KRH19237
KRH21069
KRH37441
KRH50394
KRH73525

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	KRH73525	AT3G11410.1	19407142
AT2G38310.1	KRG89350	AT4G18340.1	19407142
AT2G38310.1	KRH11184	AT4G18340.1	19407142
AT2G38310.1	KRH21069	AT4G18340.1	19407142
AT2G38310.1	KRH50394	AT4G18340.1	19407142
AT2G38310.1	KRH02667	AT4G26080.1	19407142
AT2G38310.1	KRH12454	AT4G26080.1	19407142
AT2G38310.1	KRH19237	AT4G26080.1	19407142
AT2G38310.1	KRH37441	AT4G26080.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49452	Soybean	plastid	94.92	94.38
TraesCS4A01G114400.1	Wheat	cytosol	65.54	64.8
KRH76014	Soybean	cytosol	77.97	63.89
AT2G38310.1	Thale cress	plastid	73.45	62.8
Solyc09g015380.1.1	Tomato	plastid	71.19	62.69
PGSC0003DMT400028658	Potato	nucleus	74.58	61.97
CDX91449	Canola	plastid	72.32	61.84
Bra017125.1-P	Field mustard	plastid	71.19	61.76
CDY18391	Canola	plastid	71.19	61.76
CDY54415	Canola	cytosol	71.19	61.76
Bra005115.1-P	Field mustard	plastid	51.41	61.07
Solyc10g085310.1.1	Tomato	plastid	73.45	61.03
Bra000052.1-P	Field mustard	plastid	70.62	60.39
CDY07739	Canola	plastid	70.62	60.39
VIT_13s0067g01940.t01	Wine grape	plastid	72.32	60.38
GSMUA_Achr9P04600_001	Banana	cytosol	48.59	60.14
CDY54453	Canola	plastid	70.62	60.1
PGSC0003DMT400075056	Potato	plastid	72.32	59.81
CDY14471	Canola	plastid	69.49	59.42
Solyc10g076410.1.1	Tomato	plastid	67.8	59.11
PGSC0003DMT400041080	Potato	mitochondrion	68.93	58.94
GSMUA_Achr6P32790_001	Banana	cytosol	69.49	58.29
KRH73249	Soybean	plastid	67.8	57.69
TraesCS1B01G306800.1	Wheat	mitochondrion	61.58	56.19
GSMUA_AchrUn_...	Banana	plastid	49.72	55.7
Zm00001d038436_P001	Maize	plastid	62.71	55.5
TraesCS1A01G297600.1	Wheat	mitochondrion	62.71	55.22
HORVU1Hr1G070420.1	Barley	mitochondrion	62.15	54.73
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	62.15	54.73
GSMUA_Achr9P17980_001	Banana	cytosol	45.76	54.36
TraesCS2D01G087500.1	Wheat	plastid	64.97	53.74
Zm00001d047705_P001	Maize	plastid	66.1	53.67
KRH14908	Soybean	plastid	66.1	53.67
HORVU3Hr1G039010.1	Barley	plastid	62.15	53.4
HORVU3Hr1G088100.1	Barley	plastid	62.15	53.4
GSMUA_Achr11P...	Banana	cytosol, plastid	47.46	53.16
EER92405	Sorghum	plastid	66.67	53.15
TraesCS2B01G105300.1	Wheat	plastid	64.97	53.0
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	65.54	52.73
GSMUA_Achr5P29490_001	Banana	plastid	48.02	52.47
TraesCS3D01G342000.1	Wheat	plastid	61.02	52.43
TraesCS3A01G348400.1	Wheat	plastid	61.02	52.43
EES19683	Sorghum	plastid	63.84	52.31
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	61.02	52.17
TraesCS4B01G189800.1	Wheat	cytosol	65.54	51.79
Os03t0297600-01	Rice	cytosol	66.67	51.53
TraesCS4D01G191200.1	Wheat	cytosol	64.97	51.34
HORVU4Hr1G055220.1	Barley	cytosol	64.97	51.34
Os05t0473000-01	Rice	cytosol	62.71	51.15
KRH45453	Soybean	cytosol	59.89	50.0
Zm00001d043014_P001	Maize	cytosol	59.89	49.77
KRH75621	Soybean	cytosol	59.32	49.07
KRH47929	Soybean	cytosol	50.28	48.11
GSMUA_Achr8P21220_001	Banana	cytosol	45.76	47.65
KRH31193	Soybean	cytosol, golgi, plastid	68.36	47.08
KRH21267	Soybean	cytosol	48.59	46.49
KRH11022	Soybean	cytosol	48.59	46.49
KRH52194	Soybean	cytosol	48.59	45.99
KRH18155	Soybean	cytosol	49.15	45.55
KRH61500	Soybean	cytosol	48.59	45.5
KRH74424	Soybean	cytosol	56.5	45.25
KRH65845	Soybean	cytosol	49.15	45.08
KRH05492	Soybean	cytosol	46.89	44.15
KRH53449	Soybean	cytosol	47.46	43.98
GSMUA_Achr10P...	Banana	cytosol, plastid	48.59	43.43
Os01t0827800-00	Rice	plastid	62.71	43.36
KRH65286	Soybean	cytosol	22.03	42.86
KRH06494	Soybean	cytosol, extracellular, vacuole	43.5	40.31
TraesCS2A01G089400.1	Wheat	plastid	64.97	40.21
KRH15519	Soybean	cytosol	47.46	40.0
KRH16733	Soybean	cytosol	22.6	38.1
KRH39536	Soybean	plastid	56.5	37.59
OQU87775	Sorghum	endoplasmic reticulum, extracellular	57.63	37.5
Zm00001d012475_P001	Maize	cytosol	59.32	33.65

Protein Annotations

EMBL:ACUP02011435	EnsemblPlants:KRH00319	EnsemblPlantsGene:GLYMA_18G206000	EntrezGene:100805378	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF48	PFAM:PF10604	ProteinID:KRH00319
ProteinID:KRH00319.1	ProteinID:KRH00320.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI000233E6D1	UniProt:K7MTN5
MapMan:11.1.2.1.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:48972370..48976819

Molecular Weight (calculated)

19458.2 Da

IEP (calculated)

7.061

GRAVY (calculated)

-0.044

Length

177 amino acids

Sequence
(BLAST)

001: MLPNNPSTIV PDAVARHHTH VVSPQQCCSA VVQEIAAPVS TVWSVVRRFD NPQAYKHFVK SCHVILGDGD VGTLREVHVI SGLPAAVSTE RLDVLDDERH
101: VIGFSMVGGD HRLFNYRSVT TLHPRSAAGT VVVESYVVDV PPGNTTEDTR VFVDTILRCN LQSLAKFAEN LTKLHQR

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.