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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • vacuole 1
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid, vacuole
BaCelLo:plastid
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G080290.6
HORVU1Hr1G094840.9
HORVU3Hr1G050340.1
HORVU3Hr1G067360.1
HORVU3Hr1G067380.4
HORVU3Hr1G085930.3
HORVU4Hr1G060370.1
HORVU7Hr1G029040.1
HORVU7Hr1G079650.7
HORVU7Hr1G093620.9

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT2G38310.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT2G38310.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT2G38310.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT2G38310.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT2G38310.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT2G38310.1 HORVU1Hr1G080290.6 AT1G72770.1 19624469
AT2G38310.1 HORVU1Hr1G094840.9 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G050340.1 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G067360.1 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G067380.4 AT1G72770.1 19624469
AT2G38310.1 HORVU7Hr1G029040.1 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G085930.3 AT3G11410.1 19407142
AT2G38310.1 HORVU4Hr1G060370.1 AT3G11410.1 19407142
AT2G38310.1 HORVU7Hr1G079650.7 AT4G18340.1 19407142
AT2G38310.1 HORVU3Hr1G085930.3 AT5G59220.1 19407142
AT2G38310.1 HORVU4Hr1G060370.1 AT5G59220.1 19407142
AT2G40330.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT2G40330.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT2G40330.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT2G40330.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT2G40330.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT2G40330.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT2G40330.1 HORVU1Hr1G080290.6 AT1G72770.1 19624469
AT2G40330.1 HORVU1Hr1G094840.9 AT1G72770.1 19624469
AT2G40330.1 HORVU3Hr1G050340.1 AT1G72770.1 19624469
AT2G40330.1 HORVU3Hr1G067360.1 AT1G72770.1 19624469
AT2G40330.1 HORVU3Hr1G067380.4 AT1G72770.1 19624469
AT2G40330.1 HORVU7Hr1G029040.1 AT1G72770.1 19624469
AT2G40330.1 HORVU7Hr1G093620.9 AT2G20000.1 17944809
AT5G05440.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT5G05440.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT5G05440.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT5G05440.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT5G05440.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT5G05440.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT5G05440.1 HORVU1Hr1G080290.6 AT1G72770.1 19624469
AT5G05440.1 HORVU1Hr1G094840.9 AT1G72770.1 19624469
AT5G05440.1 HORVU3Hr1G050340.1 AT1G72770.1 19624469
AT5G05440.1 HORVU3Hr1G067360.1 AT1G72770.1 19624469
AT5G05440.1 HORVU3Hr1G067380.4 AT1G72770.1 19624469
AT5G05440.1 HORVU7Hr1G029040.1 AT1G72770.1 19624469
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G088100.1 Barley plastid 100.0 100.0
TraesCS3D01G342000.1 Wheat plastid 96.6 96.6
TraesCS3A01G348400.1 Wheat plastid 95.15 95.15
TraesCS3B01G380300.1 Wheat mitochondrion, plastid 94.66 94.2
Zm00001d038436_P001 Maize plastid 79.13 81.5
HORVU1Hr1G070420.1 Barley mitochondrion 78.16 80.1
EES19683 Sorghum plastid 81.55 77.78
Zm00001d043014_P001 Maize cytosol 70.87 68.54
Bra028758.1-P Field mustard cytosol 50.97 63.64
KRH00319 Soybean cytosol 53.4 62.15
Os01t0827800-00 Rice plastid 77.18 62.11
HORVU4Hr1G055220.1 Barley cytosol 66.99 61.61
KRH49452 Soybean plastid 52.43 60.67
GSMUA_Achr11P... Banana cytosol, plastid 45.63 59.49
GSMUA_Achr5P29490_001 Banana plastid 46.6 59.26
Solyc05g052420.1.1 Tomato cytosol 23.3 58.54
KRH73249 Soybean plastid 57.28 56.73
Bra017125.1-P Field mustard plastid 55.83 56.37
CDY54415 Canola cytosol 55.83 56.37
CDY18391 Canola plastid 55.83 56.37
Solyc03g095780.1.1 Tomato plastid 54.37 55.72
Solyc10g076410.1.1 Tomato plastid 54.85 55.66
CDY07739 Canola plastid 55.34 55.07
Bra000052.1-P Field mustard plastid 55.34 55.07
CDX91449 Canola plastid 55.34 55.07
CDY04951 Canola cytosol 52.43 54.82
PGSC0003DMT400053102 Potato cytosol, plastid 53.4 54.73
PGSC0003DMT400053120 Potato cytosol, plastid 53.4 54.73
PGSC0003DMT400053119 Potato cytosol, plastid 53.4 54.73
VIT_13s0067g01940.t01 Wine grape plastid 56.31 54.72
CDX93191 Canola cytosol 53.88 54.68
KRH76014 Soybean cytosol 57.28 54.63
AT2G38310.1 Thale cress plastid 54.85 54.59
CDY14471 Canola plastid 54.85 54.59
Solyc10g085310.1.1 Tomato plastid 56.31 54.46
PGSC0003DMT400028658 Potato nucleus 56.31 54.46
Bra005115.1-P Field mustard plastid 39.32 54.36
CDY54453 Canola plastid 54.85 54.33
Bra017012.1-P Field mustard cytosol 53.88 54.15
CDY52923 Canola cytosol 53.88 54.15
PGSC0003DMT400041080 Potato mitochondrion 54.37 54.11
PGSC0003DMT400069734 Potato mitochondrion, plastid 53.88 53.37
CDX98844 Canola cytosol 52.43 52.94
PGSC0003DMT400061535 Potato plastid 55.83 52.75
KRH14908 Soybean plastid 55.83 52.75
AT5G05440.1 Thale cress cytosol 51.94 52.71
CDX70150 Canola cytosol 51.94 52.45
Bra009113.1-P Field mustard cytosol 51.94 52.45
Solyc09g015380.1.1 Tomato plastid 50.97 52.24
VIT_08s0058g00470.t01 Wine grape plastid 57.28 51.98
HORVU3Hr1G030210.5 Barley plastid 29.13 51.72
HORVU4Hr1G060110.1 Barley mitochondrion 24.27 51.02
CDY72318 Canola cytosol 50.0 50.74
Bra005853.1-P Field mustard cytosol 50.0 50.74
OQU87775 Sorghum endoplasmic reticulum, extracellular 66.99 50.74
AT2G40330.1 Thale cress cytosol 52.91 50.7
CDX74796 Canola cytosol, nucleus, plastid 51.94 50.47
PGSC0003DMT400075056 Potato plastid 52.43 50.47
CDX80959 Canola cytosol 49.51 50.25
HORVU7Hr1G088140.2 Barley cytosol 47.57 50.0
Bra000184.1-P Field mustard cytosol, mitochondrion 51.46 50.0
CDY07608 Canola cytosol, mitochondrion 51.46 50.0
Bra004967.1-P Field mustard mitochondrion 50.97 49.53
CDY24911 Canola cytosol, mitochondrion 50.97 49.3
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 50.0 48.58
HORVU4Hr1G060100.1 Barley mitochondrion 22.82 47.96
HORVU3Hr1G040680.1 Barley plastid 25.73 46.09
Zm00001d012475_P001 Maize cytosol 68.93 45.51
HORVU0Hr1G032390.2 Barley cytosol, extracellular 18.93 45.35
KRH31193 Soybean cytosol, golgi, plastid 54.37 43.58
Solyc06g050500.2.1 Tomato plastid 57.77 43.27
HORVU7Hr1G079270.1 Barley cytosol 34.47 36.04
HORVU1Hr1G050110.1 Barley plastid 46.6 35.04
HORVU3Hr1G054230.1 Barley mitochondrion 25.73 33.33
HORVU1Hr1G030390.2 Barley extracellular, mitochondrion, plasma membrane 43.2 30.58
HORVU3Hr1G107030.1 Barley mitochondrion 29.61 21.11
Protein Annotations
EMBL:AK362590EnsemblPlants:HORVU3Hr1G039010.1EnsemblPlantsGene:HORVU3Hr1G039010Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sfPANTHER:PTHR31213PANTHER:PTHR31213:SF28PFAM:PF10604SEG:segSUPFAM:SSF55961
UniParc:UPI0002005FDAUniProt:F2DFC3MapMan:11.1.2.1.1.1:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DFC3]
Coordinates
chrchr3H:+:228276304..228277242
Molecular Weight (calculated)
22009.3 Da
IEP (calculated)
9.046
GRAVY (calculated)
-0.058
Length
206 amino acids
Sequence
(BLAST)
001: MPYAAARPSP QQHSRISAAC KALVAQGAAV PGEVARHHEH AAGAGQCCSA VVQAIAAPVE AVWSVVRRFD RPQAYKRFIK SCRLVDGDGG AVGSVREVRV
101: VSGLPGTSSR ERLEILDDER RVLSFRIVGG EHRLANYRSV TTVNEVASTV AGAPRVTLVV ESYVVDVPPG NTGDETRMFV DTIVRCNLQS LARTAEQLAL
201: AAPRVN
Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.