Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G392900.2 | Wheat | cytosol | 92.7 | 92.08 |
| TraesCS7A01G398600.1 | Wheat | cytosol | 92.7 | 92.08 |
| TraesCS7B01G299300.1 | Wheat | cytosol, mitochondrion | 87.78 | 91.55 |
| Os06t0622500-00 | Rice | cytosol | 44.75 | 88.68 |
| KXG33895 | Sorghum | cytosol | 82.87 | 82.76 |
| Zm00001d042523_P001 | Maize | cytosol | 81.67 | 81.89 |
| KRH41728 | Soybean | extracellular, vacuole | 4.12 | 65.96 |
| GSMUA_Achr1P19740_001 | Banana | cytosol | 59.23 | 59.31 |
| VIT_11s0016g03260.t01 | Wine grape | cytosol | 56.84 | 56.24 |
| Bra039034.1-P | Field mustard | cytosol | 53.39 | 54.1 |
| CDY35917 | Canola | cytosol | 53.39 | 54.1 |
| KRH01476 | Soybean | cytosol | 54.32 | 54.1 |
| PGSC0003DMT400083452 | Potato | cytosol | 7.97 | 54.05 |
| CDY40468 | Canola | cytosol | 53.39 | 54.03 |
| AT2G20000.1 | Thale cress | cytosol | 52.46 | 53.09 |
| KRH18292 | Soybean | nucleus | 52.99 | 52.71 |
| KRG93804 | Soybean | cytosol | 52.72 | 52.44 |
| PGSC0003DMT400006585 | Potato | cytosol | 51.93 | 51.04 |
| Solyc03g061590.2.1 | Tomato | cytosol | 11.69 | 48.62 |
| Solyc03g061600.2.1 | Tomato | endoplasmic reticulum | 40.77 | 47.16 |
| CDY30158 | Canola | cytosol | 41.83 | 44.12 |
| CDX97740 | Canola | cytosol | 41.57 | 43.9 |
| AT3G16320.1 | Thale cress | cytosol | 42.23 | 43.68 |
| Bra027173.1-P | Field mustard | cytosol | 41.97 | 40.25 |
| CDY35918 | Canola | cytosol | 12.75 | 38.71 |
| HORVU0Hr1G027080.4 | Barley | plastid | 15.4 | 19.33 |
| HORVU6Hr1G062870.1 | Barley | cytosol, plastid | 15.01 | 17.41 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.1 | UniProt:A0A287XDE2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:HORVU7Hr1G093620 | EnsemblPlants:HORVU7Hr1G093620.9 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF00515 | PFAM:PF12895 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR12558 | PANTHER:PTHR12558:SF13 |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI000B47AB99 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:571432552..571442113
Molecular Weight (calculated)
85066.5 Da
IEP (calculated)
6.864
GRAVY (calculated)
-0.321
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: TNVQLLATCY LHNNQPYAAY HILKGKKLPE SRYLFAISCF RMNLLREAEE TLCPVNEPNI EVPSGATGHY LLGLIYRFVI HGTTEPCLAR VLIRDTWFII
101: YTSPPCRYTD RVTAAAEQFT QALTLDPLLW AAYEELCILG VAEDANECFT EATALRLQQE QASTSNLEKS NFVNENRVLS PNVSASLVDI SPKHIKQLSA
201: NNTAEVPGYP HLRATALHVQ NSVPSNVLQF DTPSPTVTQT SGTAPPPLFR NLHAYQNTTS GDAPAKPKVN AVNQPPRRKY LDEARLKKVT GRLFNTSNDS
301: VPRRSARLSR DTPINSNSNI SQFGGNGPDH SSGKLRVNSS TSSKLCSTAI RSVQVRKGKP RATEIFDEGS RYEAVDEMWT DNIVATSSSL SIAEGRCFEQ
401: DKAERILSQD SKMATGIREL MGLLRTLGEG YRLSCLFKCQ EALEIYRKLP EPQFNTGWVL CQVGKAYFEL VDYLEADHFF ELAHRLSPCT LEGMDIYSTV
501: LYHLNEEMRL SYLAQELIFV DRLSPQAWCA VGNCFALRKD HETALKNFQR AVQLDSRVAY AHTLCGHEYS ALEDYKNSVK FYRCALQVDE RHYNAWYGLG
601: VVYLRQEKFE FAEHHFRRAF QINPRSSVLM CYLGMALHAL KRDEDALEMM EKAIFSDKKN PLPKYQKALI LVGLQKYQEA LDELERLKEI APHESSMYAL
701: MGKIYKQLNI LDKAVFCFGV ALDLKPPAAD LAIIKSAMEK VHLPDELMDD DDL
101: YTSPPCRYTD RVTAAAEQFT QALTLDPLLW AAYEELCILG VAEDANECFT EATALRLQQE QASTSNLEKS NFVNENRVLS PNVSASLVDI SPKHIKQLSA
201: NNTAEVPGYP HLRATALHVQ NSVPSNVLQF DTPSPTVTQT SGTAPPPLFR NLHAYQNTTS GDAPAKPKVN AVNQPPRRKY LDEARLKKVT GRLFNTSNDS
301: VPRRSARLSR DTPINSNSNI SQFGGNGPDH SSGKLRVNSS TSSKLCSTAI RSVQVRKGKP RATEIFDEGS RYEAVDEMWT DNIVATSSSL SIAEGRCFEQ
401: DKAERILSQD SKMATGIREL MGLLRTLGEG YRLSCLFKCQ EALEIYRKLP EPQFNTGWVL CQVGKAYFEL VDYLEADHFF ELAHRLSPCT LEGMDIYSTV
501: LYHLNEEMRL SYLAQELIFV DRLSPQAWCA VGNCFALRKD HETALKNFQR AVQLDSRVAY AHTLCGHEYS ALEDYKNSVK FYRCALQVDE RHYNAWYGLG
601: VVYLRQEKFE FAEHHFRRAF QINPRSSVLM CYLGMALHAL KRDEDALEMM EKAIFSDKKN PLPKYQKALI LVGLQKYQEA LDELERLKEI APHESSMYAL
701: MGKIYKQLNI LDKAVFCFGV ALDLKPPAAD LAIIKSAMEK VHLPDELMDD DDL
001: MEAMLVDCVN NSLRHFVYKN AIFMCERLCA EFPSEVNLQL LATSYLQNNQ AYSAYHLLKG TQMAQSRYLF ALSCFQMDLL NEAESALCPV NEPGAEIPNG
101: AAGHYLLGLI YKYTDRRKNA AQQFKQSLTI DPLLWAAYEE LCILGAAEEA TAVFGETAAL SIQKQYMQQL STSLGLNTYN EERNSTSTKN TSSEDYSPRQ
201: SKHTQSHGLK DISGNFHSHG VNGGVSNMSF YNTPSPVAAQ LSGIAPPPLF RNFQPAVANP NSLITDSSPK STVNSTLQAP RRKFVDEGKL RKISGRLFSD
301: SGPRRSSRLS ADSGANINSS VATVSGNVNN ASKYLGGSKL SSLALRSVTL RKGHSWANEN MDEGVRGEPF DDSRPNTAST TGSMASNDQE DETMSIGGIA
401: MSSQTITIGV SEILNLLRTL GEGCRLSYMY RCQEALDTYM KLPHKHYNTG WVLSQVGKAY FELIDYLEAE KAFRLARLAS PYCLEGMDIY STVLYHLKED
501: MKLSYLAQEL ISTDRLAPQS WCAMGNCYSL QKDHETALKN FLRAVQLNPR FAYAHTLCGH EYTTLEDFEN GMKSYQNALR VDTRHYNAWY GLGMIYLRQE
601: KLEFSEHHFR MAFLINPSSS VIMSYLGTSL HALKRSEEAL EIMEQAIVAD RKNPLPMYQK ANILVCLERL DEALEVLEEL KEYAPSESSV YALMGRIYKR
701: RNMHDKAMLH FGLALDMKPP ATDVAAIKAA MEKLHVPDEI DESP
101: AAGHYLLGLI YKYTDRRKNA AQQFKQSLTI DPLLWAAYEE LCILGAAEEA TAVFGETAAL SIQKQYMQQL STSLGLNTYN EERNSTSTKN TSSEDYSPRQ
201: SKHTQSHGLK DISGNFHSHG VNGGVSNMSF YNTPSPVAAQ LSGIAPPPLF RNFQPAVANP NSLITDSSPK STVNSTLQAP RRKFVDEGKL RKISGRLFSD
301: SGPRRSSRLS ADSGANINSS VATVSGNVNN ASKYLGGSKL SSLALRSVTL RKGHSWANEN MDEGVRGEPF DDSRPNTAST TGSMASNDQE DETMSIGGIA
401: MSSQTITIGV SEILNLLRTL GEGCRLSYMY RCQEALDTYM KLPHKHYNTG WVLSQVGKAY FELIDYLEAE KAFRLARLAS PYCLEGMDIY STVLYHLKED
501: MKLSYLAQEL ISTDRLAPQS WCAMGNCYSL QKDHETALKN FLRAVQLNPR FAYAHTLCGH EYTTLEDFEN GMKSYQNALR VDTRHYNAWY GLGMIYLRQE
601: KLEFSEHHFR MAFLINPSSS VIMSYLGTSL HALKRSEEAL EIMEQAIVAD RKNPLPMYQK ANILVCLERL DEALEVLEEL KEYAPSESSV YALMGRIYKR
701: RNMHDKAMLH FGLALDMKPP ATDVAAIKAA MEKLHVPDEI DESP
Arabidopsis Description
CDC27BCell division cycle protein 27 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8LGU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.