Factsheet for HORVU3Hr1G013350.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

extracellular: 26928395

msms PMID: 26928395 doi

A Sultan, B Andersen, B Svensson, C Finnie

Agricultural and Environmental Proteomics, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 224, DK-2800 Kgs. Lyngby, Denmark., Enzyme and Protein Chemistry, Department of Systems Biology, Technical University of Denmark , Elektrovej, Building 375, DK-2800 Kgs. Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G087400.1	Wheat	cytosol, golgi, unclear	78.69	94.86
TraesCS3A01G073300.1	Wheat	cytosol, unclear	78.69	94.86
TraesCS3D01G073000.1	Wheat	golgi	78.36	94.47
Zm00001d008619_P001	Maize	plastid	71.15	86.8
Zm00001d039865_P002	Maize	cytosol	73.44	86.49
Zm00001d040375_P001	Maize	cytosol	30.82	85.45
Os01t0147900-01	Rice	extracellular	70.82	85.38
PGSC0003DMT400071330	Potato	cytosol, extracellular	67.87	81.5
GSMUA_Achr11P...	Banana	plasma membrane	66.23	79.53
GSMUA_Achr5P28700_001	Banana	cytosol	66.23	79.53
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	65.9	79.13
CDY02939	Canola	cytosol	65.57	79.05
CDX76095	Canola	cytosol	65.57	78.74
CDX76094	Canola	cytosol	65.57	78.74
Bra014743.1-P	Field mustard	cytosol	65.57	78.74
AT3G55440.1	Thale cress	cytosol	65.57	78.74
CDY02937	Canola	cytosol	64.92	77.95
Bra014744.1-P	Field mustard	cytosol	64.92	77.95
KRH10260	Soybean	nucleus	64.59	77.87
KRH23071	Soybean	cytosol, nucleus	54.1	77.83
VIT_06s0004g04800.t01	Wine grape	cytosol	63.61	76.38
Solyc06g005490.2.1	Tomato	plastid	63.61	75.49
GSMUA_Achr9P03330_001	Banana	cytosol	64.59	75.19
Solyc04g011510.2.1	Tomato	plastid	63.28	74.52
EES00320	Sorghum	cytosol, plastid	74.43	74.43
GSMUA_AchrUn_...	Banana	cytosol	45.9	60.34
CDY40220	Canola	cytosol	42.62	58.3
HORVU5Hr1G082630.5	Barley	plastid	52.13	52.65
Bra007163.1-P	Field mustard	cytosol	32.46	51.56
CDY53690	Canola	cytosol	31.15	47.26
Bra003214.1-P	Field mustard	cytosol	31.15	47.26
CDY41233	Canola	cytosol, extracellular	25.25	45.03
Zm00001d030216_P001	Maize	mitochondrion	33.44	39.38

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:2.1.1.3	MapMan:3.1.2.1
Gene3D:3.20.20.70	UniProt:A0A287K550	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G013350	EnsemblPlants:HORVU3Hr1G013350.1	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B
PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF16	SUPFAM:SSF51351
TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI000B472432
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:28804800..28808275

Molecular Weight (calculated)

32262.8 Da

IEP (calculated)

7.843

GRAVY (calculated)

0.078

Length

305 amino acids

Sequence
(BLAST)

001: ITSQPPFPPP FISSPLPPSC LSSSTRRRSP PNPISISRPP VPTNPIRPAS VAMGRKFFVG GNWKCNGTVE QVEAIVQTLN AGQIVSPDVV EVVVSPPYVF
101: LPIVKAKLRP EIQVAAQNCW VKKGGAFTGE VSAEMLANLG VPWVILGHSE RRSLLGESSE FVGEKVAYAL AQGLKVIACV GETLEQREAG STMEVVAEQT
201: KAIAGKIKDW SNVVVAYEPV WAIGTGKVAT PAQAQEVHAN LRDWLKTNVS PEVAESTRII YGGSVTGASC KELAAQADVD GFLVGGASLK PEFIDIINAA
301: AVKSA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.