Factsheet for Bra003214.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53690	Canola	cytosol	100.0	100.0
AT3G55440.1	Thale cress	cytosol	55.72	44.09
Bra014744.1-P	Field mustard	cytosol	55.72	44.09
Bra014743.1-P	Field mustard	cytosol	55.22	43.7
PGSC0003DMT400071330	Potato	cytosol, extracellular	51.74	40.94
Solyc04g011510.2.1	Tomato	plastid	50.75	39.38
TraesCS3B01G392000.1	Wheat	cytosol	48.26	39.27
GSMUA_Achr11P...	Banana	plasma membrane	49.25	38.98
TraesCS3A01G359400.1	Wheat	golgi	48.76	38.28
Zm00001d012407_P004	Maize	cytosol	48.26	37.89
GSMUA_Achr5P28700_001	Banana	cytosol	47.76	37.8
Zm00001d009835_P001	Maize	cytosol	24.38	37.69
KXG33676	Sorghum	cytosol, plastid	47.76	37.5
TraesCS3D01G073000.1	Wheat	golgi	46.77	37.15
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	46.77	37.01
Bra007163.1-P	Field mustard	cytosol	35.32	36.98
Os01t0841600-01	Rice	cytosol	45.27	35.69
GSMUA_AchrUn_...	Banana	cytosol	36.82	31.9
HORVU3Hr1G013350.1	Barley	extracellular, plastid	47.26	31.15
Zm00001d029307_P001	Maize	cytosol	23.38	27.33
Bra030316.1-P	Field mustard	plastid	39.3	25.32
Bra031167.1-P	Field mustard	plastid	39.3	24.69

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	Gene3D:3.20.20.70	MapMan:50.5.3
InterPro:Aldolase_TIM	EnsemblPlantsGene:Bra003214	EnsemblPlants:Bra003214.1	EnsemblPlants:Bra003214.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004807	GO:GO:0008150	GO:GO:0008152	InterPro:IPR000652	InterPro:IPR013785	UniProt:M4CG81
PFAM:PF00121	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF16	SUPFAM:SSF51351	InterPro:TIM_sf
InterPro:Triosephosphate_isomerase	UniParc:UPI00025414B3	SEG:seg	:	:	:

Description

AT3G55440 (E=3e-031) ATCTIMC, TPI | TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase

Coordinates

chrA07:+:11933385..11934507

Molecular Weight (calculated)

22249.3 Da

IEP (calculated)

6.849

GRAVY (calculated)

0.276

Length

201 amino acids

Sequence
(BLAST)

001: MLVNLDMPWF ILGHSERRAL LNESNEFFGD KVAYALAQGL KVIACVGETL EQREAGSTMD VVAAQTKAIA VLVSTRSTCI ATLVRQYMIG VELVKCCHRL
101: WTSADHLNRK LPQLKLRKKW LAKNVGEDVA ATTHIIYGGS VNSGNCQELD GQTDVDGFLV GGASLKVHIL CSDLLVCFNQ YHYLMCLLSL LLLHPEFIDI
201: I

Best Arabidopsis Sequence Match ( AT2G21170.2 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKNGTKD SIAKLISDLN SATLEADVDV VVSPPFVYID
101: QVKSSLTDRI DISGQNSWVG KGGAFTGEIS VEQLKDLGCK WVILGHSERR HVIGEKDEFI GKKAAYALSE GLGVIACIGE KLEEREAGKT FDVCFAQLKA
201: FADAVPSWDN IVVAYEPVWA IGTGKVASPQ QAQEVHVAVR GWLKKNVSEE VASKTRIIYG GSVNGGNSAE LAKEEDIDGF LVGGASLKGP EFATIVNSVT
301: SKKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.