Factsheet for GSMUA_AchrUn_randomP18660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28700_001	Banana	cytosol	75.0	68.5
GSMUA_Achr11P...	Banana	plasma membrane	71.12	64.96
PGSC0003DMT400071330	Potato	cytosol, extracellular	65.09	59.45
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	64.66	59.06
GSMUA_Achr9P03330_001	Banana	cytosol	66.38	58.78
CDX76095	Canola	cytosol	64.22	58.66
CDX76094	Canola	cytosol	64.22	58.66
Bra014743.1-P	Field mustard	cytosol	64.22	58.66
CDY02939	Canola	cytosol	63.79	58.5
Bra014744.1-P	Field mustard	cytosol	63.79	58.27
VIT_06s0004g04800.t01	Wine grape	cytosol	63.36	57.87
CDY02937	Canola	cytosol	63.36	57.87
KRH10260	Soybean	nucleus	62.93	57.71
Os01t0841600-01	Rice	cytosol	63.36	57.65
AT3G55440.1	Thale cress	cytosol	62.93	57.48
Zm00001d012407_P004	Maize	cytosol	62.93	57.03
Solyc06g005490.2.1	Tomato	plastid	62.93	56.81
TraesCS3B01G392000.1	Wheat	cytosol	59.91	56.28
KXG33676	Sorghum	cytosol, plastid	62.07	56.25
Solyc04g011510.2.1	Tomato	plastid	62.5	55.98
TraesCS3D01G073000.1	Wheat	golgi	60.78	55.73
TraesCS3A01G359400.1	Wheat	golgi	60.78	55.08
KRH23071	Soybean	cytosol, nucleus	47.84	52.36
HORVU3Hr1G013350.1	Barley	extracellular, plastid	60.34	45.9
Zm00001d009835_P001	Maize	cytosol	25.43	45.38
Bra007163.1-P	Field mustard	cytosol	34.48	41.67
CDY40220	Canola	cytosol	38.79	40.36
CDY53690	Canola	cytosol	31.9	36.82
Bra003214.1-P	Field mustard	cytosol	31.9	36.82
GSMUA_Achr9P24140_001	Banana	plastid	46.12	35.31
GSMUA_Achr3P26710_001	Banana	plastid	46.12	34.41
CDY41233	Canola	cytosol, extracellular	25.0	33.92
Zm00001d029307_P001	Maize	cytosol	24.57	33.14

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	Gene3D:3.20.20.70	MapMan:35.1
InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0008150	GO:GO:0008152
EnsemblPlantsGene:GSMUA_AchrUn_randomG18660_001	EnsemblPlants:GSMUA_AchrUn_randomP18660_001	EnsemblPlants:GSMUA_AchrUn_randomT18660_001	InterPro:IPR000652	InterPro:IPR013785	UniProt:M0UAC5
PFAM:PF00121	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF16	SUPFAM:SSF51351	InterPro:TIM_sf
InterPro:Triosephosphate_isomerase	UniParc:UPI000295698E	SEG:seg	:	:	:

Description

Triosephosphate isomerase, cytosolic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18660_001]

Coordinates

chrchrUn_random:+:89414033..89418188

Molecular Weight (calculated)

25158.9 Da

IEP (calculated)

4.592

GRAVY (calculated)

0.063

Length

232 amino acids

Sequence
(BLAST)

001: MAWKFFVGGD WNFNGTSEEV KKIVSTLNDR KVASADVVDV VVSPPYVFLR IVKSLLRPDF HVAAQNCWTE SRKGWSGYEL LLLGESNEFV GDKVAYALSK
101: GIKVIGCVGE TLQCESGATM DVIAAQTKTI ACFTISGLGN WNWEGCYSCW EVDSELCKWL QINVSVEVAE STRIIYGGSV NGANCKELAA QPDVDGFLAG
201: GASLKPEFVD IINSATVKSS ARGLLPRSIE DP

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.