Factsheet for Zm00001d029307_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009835_P001	Maize	cytosol	67.44	89.23
Zm00001d040375_P001	Maize	cytosol	34.88	54.55
Zm00001d012407_P004	Maize	cytosol	51.74	34.77
KXG33676	Sorghum	cytosol, plastid	48.84	32.81
TraesCS3B01G392000.1	Wheat	cytosol	46.51	32.39
Bra007163.1-P	Field mustard	cytosol	36.05	32.29
Os01t0841600-01	Rice	cytosol	47.09	31.76
TraesCS3A01G359400.1	Wheat	golgi	47.09	31.64
GSMUA_Achr5P28700_001	Banana	cytosol	45.35	30.71
GSMUA_Achr11P...	Banana	plasma membrane	44.19	29.92
GSMUA_Achr9P03330_001	Banana	cytosol	44.19	29.01
Zm00001d008619_P001	Maize	plastid	41.86	28.8
VIT_06s0004g04800.t01	Wine grape	cytosol	42.44	28.74
Solyc06g005490.2.1	Tomato	plastid	42.44	28.4
PGSC0003DMT400071330	Potato	cytosol, extracellular	41.86	28.35
Zm00001d039865_P002	Maize	cytosol	42.44	28.19
CDY02939	Canola	cytosol	41.28	28.06
CDX76094	Canola	cytosol	41.28	27.95
Bra014743.1-P	Field mustard	cytosol	41.28	27.95
CDY40220	Canola	cytosol	36.05	27.8
KRH10260	Soybean	nucleus	40.7	27.67
AT3G55440.1	Thale cress	cytosol	40.7	27.56
CDY02937	Canola	cytosol	40.7	27.56
CDX76095	Canola	cytosol	40.7	27.56
Bra014744.1-P	Field mustard	cytosol	40.7	27.56
Solyc04g011510.2.1	Tomato	plastid	41.28	27.41
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	39.53	26.77
Zm00001d030216_P001	Maize	mitochondrion	37.79	25.1
GSMUA_AchrUn_...	Banana	cytosol	33.14	24.57
Bra003214.1-P	Field mustard	cytosol	27.33	23.38
CDY53690	Canola	cytosol	27.33	23.38
CDY41233	Canola	cytosol, extracellular	22.67	22.81
KRH23071	Soybean	cytosol, nucleus	27.33	22.17
Zm00001d006221_P001	Maize	plastid	34.88	20.13
Zm00001d021310_P001	Maize	extracellular	34.3	19.41

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	Gene3D:3.20.20.70	MapMan:50.5.3
UniProt:A0A1D6K471	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0008150
GO:GO:0008152	GO:GO:0016853	InterPro:IPR000652	InterPro:IPR013785	ProteinID:ONL98422.1	PFAM:PF00121
ScanProsite:PS00171	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF14	SUPFAM:SSF51351	InterPro:TIM_sf
InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI0008DB346D	EnsemblPlantsGene:Zm00001d029307	EnsemblPlants:Zm00001d029307_P001	EnsemblPlants:Zm00001d029307_T001

Description

Triosephosphate isomerase cytosolic

Coordinates

chr1:-:65560691..65565363

Molecular Weight (calculated)

18830.4 Da

IEP (calculated)

5.239

GRAVY (calculated)

-0.147

Length

172 amino acids

Sequence
(BLAST)

001: MDVVAAQTKA IAEKISDWTN IVLAYEPVWA IGTGKVHDGL RKWLHSNVSP AVAELTRIIY GGSVNGANCK ELAVQPDVDG FLVGGGSLKV NRDRYNDGSI
101: KHSLLKQSSL DLLTIETLGL KKNDSFSRWM SKELEELDAY VVNPSFSQDQ LFSILDVSPS CAYIGTNTKV QE

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.