Factsheet for TraesCS3B01G392000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G359400.1	Wheat	golgi	96.76	93.36
Zm00001d012407_P004	Maize	cytosol	92.71	89.45
KXG33676	Sorghum	cytosol, plastid	92.31	89.06
Os01t0841600-01	Rice	cytosol	91.09	88.24
GSMUA_Achr5P28700_001	Banana	cytosol	80.16	77.95
VIT_06s0004g04800.t01	Wine grape	cytosol	79.35	77.17
KRH10260	Soybean	nucleus	78.54	76.68
Solyc06g005490.2.1	Tomato	plastid	79.76	76.65
GSMUA_Achr11P...	Banana	plasma membrane	77.73	75.59
GSMUA_Achr9P03330_001	Banana	cytosol	80.16	75.57
KRH23071	Soybean	cytosol, nucleus	64.78	75.47
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	77.33	75.2
CDY02939	Canola	cytosol	76.52	74.7
CDX76095	Canola	cytosol	76.52	74.41
CDX76094	Canola	cytosol	76.52	74.41
Bra014743.1-P	Field mustard	cytosol	76.52	74.41
AT3G55440.1	Thale cress	cytosol	76.11	74.02
CDY02937	Canola	cytosol	75.71	73.62
Bra014744.1-P	Field mustard	cytosol	75.71	73.62
TraesCS3B01G087400.1	Wheat	cytosol, golgi, unclear	75.3	73.52
PGSC0003DMT400071330	Potato	cytosol, extracellular	74.9	72.83
Solyc04g011510.2.1	Tomato	plastid	71.26	67.95
Zm00001d009835_P001	Maize	cytosol	32.39	61.54
GSMUA_AchrUn_...	Banana	cytosol	56.28	59.91
CDY40220	Canola	cytosol	50.2	55.61
Bra007163.1-P	Field mustard	cytosol	38.06	48.96
Bra003214.1-P	Field mustard	cytosol	39.27	48.26
CDY53690	Canola	cytosol	39.27	48.26
TraesCS5B01G324800.1	Wheat	plastid	57.89	47.83
Zm00001d029307_P001	Maize	cytosol	32.39	46.51
CDY41233	Canola	cytosol, extracellular	31.58	45.61

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:2.1.1.3	MapMan:3.1.2.1
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B	PFAM:PF00121
PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF14	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf
EnsemblPlantsGene:TraesCS3B01G392000	EnsemblPlants:TraesCS3B01G392000.1	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	TIGR:cd00311	:

Description

No Description!

Coordinates

chr3B:+:617677101..617680685

Molecular Weight (calculated)

26316.6 Da

IEP (calculated)

4.949

GRAVY (calculated)

0.121

Length

247 amino acids

Sequence
(BLAST)

001: MAPRKFFVGG NWKCNGTGDD VKKIVTVLNE AEVPSEDAVE VVVSPPFVFL QQATGLLRPD FAVAAQNCWV RKGGAFTGEI SAEMLVNLQV PWVILGHSER
101: RALLNESSDF VADKVAYALA QGLKVIACIG ETLEQREAGT TMEVVAAQTK AIAEKISDWT NVVLTYEPVW AIGTGKVHDG LRKWLQANVG PAVAESTRII
201: YGGSVNGANC KELAAQPDLD GFLVGGASLK PEFVDIIKSA TVKSASA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.