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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76094 Canola cytosol 98.42 98.03
CDX76095 Canola cytosol 98.42 98.03
CDY02937 Canola cytosol 97.63 97.24
AT3G55440.1 Thale cress cytosol 96.84 96.46
PGSC0003DMT400071330 Potato cytosol, extracellular 88.14 87.8
VIT_13s0019g01090.t01 Wine grape cytosol, endoplasmic reticulum 83.79 83.46
GSMUA_Achr11P... Banana plasma membrane 83.4 83.07
GSMUA_Achr5P28700_001 Banana cytosol 83.4 83.07
Solyc04g011510.2.1 Tomato plastid 83.79 81.85
TraesCS3D01G073000.1 Wheat golgi 79.45 79.45
KXG33676 Sorghum cytosol, plastid 79.84 78.91
Os01t0841600-01 Rice cytosol 79.45 78.82
TraesCS3A01G359400.1 Wheat golgi 79.45 78.52
Zm00001d012407_P004 Maize cytosol 79.45 78.52
TraesCS3B01G392000.1 Wheat cytosol 74.7 76.52
CDY40220 Canola cytosol 65.22 73.99
HORVU3Hr1G013350.1 Barley extracellular, plastid 79.05 65.57
GSMUA_AchrUn_... Banana cytosol 58.5 63.79
Zm00001d009835_P001 Maize cytosol 30.43 59.23
CDY53690 Canola cytosol 44.66 56.22
CDY41233 Canola cytosol, extracellular 35.57 52.63
CDY15911 Canola plastid 60.87 49.36
CDX99612 Canola plastid 60.47 49.04
CDY13836 Canola plastid 60.47 47.81
CDX82002 Canola plastid 60.47 47.81
Zm00001d029307_P001 Maize cytosol 28.06 41.28
Protein Annotations
KEGG:00010+5.3.1.1KEGG:00051+5.3.1.1KEGG:00562+5.3.1.1KEGG:00710+5.3.1.1MapMan:2.1.1.3MapMan:3.1.2.1
Gene3D:3.20.20.70GO:A0A078EQK7InterPro:Aldolase_TIMEnsemblPlants:CDY02939ProteinID:CDY02939ProteinID:CDY02939.1
GO:GO:0003674GO:GO:0003824GO:GO:0004807GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00115210001InterPro:IPR000652InterPro:IPR013785HAMAP:MF_00147_BPFAM:PF00121ScanProsite:PS00171
PFscan:PS51440PANTHER:PTHR21139PANTHER:PTHR21139:SF16MetaCyc:PWY-1042MetaCyc:PWY-5484MetaCyc:PWY-6142
MetaCyc:PWY-7003SUPFAM:SSF51351TIGRFAMs:TIGR00419InterPro:TIM_sfInterPro:TrioseP_Isoase_bac/eukInterPro:Triosephosphate_isomerase
InterPro:Triosephosphate_isomerase_ASUniPathway:UPA00109UniPathway:UPA00138UniParc:UPI0004EEE19FSEG:seg:
Description
BnaC04g25470D
Coordinates
chrLK031938:+:712691..715234
Molecular Weight (calculated)
27019.4 Da
IEP (calculated)
5.793
GRAVY (calculated)
0.036
Length
253 amino acids
Sequence
(BLAST)
001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSILRPDF HVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: ALLNESNEAG DKVAYALAQG LKVIACVGET LEQREAGSTM DVVAAQTKAI ADRVSNWSNV VIAYEPVWAI GTGKVASPAQ AQEVHDELRK WLAKNVSADV
201: AATTRIIYGG SVNGGNCKEL GGQADVDGFL VGGASLKPEF IDIIKAAEVK KSA
Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)
001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA
Arabidopsis Description
CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.