CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031167.1-P	Field mustard	plastid	98.12	98.12
CDY13836	Canola	plastid	97.81	97.81
CDX99612	Canola	plastid	93.44	95.83
CDY15911	Canola	plastid	93.44	95.83
AT2G21170.3	Thale cress	plastid	89.69	91.11
Solyc10g054870.1.1	Tomato	plastid	76.88	78.85
KRG96044	Soybean	nucleus	75.94	78.64
KRH19958	Soybean	plastid	74.69	78.36
KRH67765	Soybean	extracellular, nucleus, plastid	75.62	78.32
KRH32560	Soybean	nucleus, plastid	74.38	78.29
PGSC0003DMT400011335	Potato	plastid	76.88	77.12
Solyc01g111120.2.1	Tomato	plastid	76.56	75.15
VIT_03s0038g01780.t01	Wine grape	plastid	75.94	75.0
GSMUA_Achr9P24140_001	Banana	plastid	70.62	74.59
PGSC0003DMT400004042	Potato	cytosol, plastid	75.94	74.54
TraesCS5B01G324800.1	Wheat	plastid	68.44	73.24
TraesCS5D01G331100.1	Wheat	plastid	68.44	73.24
TraesCS5A01G324200.1	Wheat	plastid	68.12	72.43
GSMUA_Achr3P26710_001	Banana	plastid	70.31	72.35
HORVU5Hr1G082630.5	Barley	plastid	67.81	71.85
Zm00001d006221_P001	Maize	plastid	65.94	70.81
Os09t0535000-02	Rice	extracellular	66.56	70.07
EER99254	Sorghum	plastid	66.56	70.07
Zm00001d021310_P001	Maize	extracellular	65.31	68.75
CDY02937	Canola	cytosol	48.44	61.02
CDX76095	Canola	cytosol	48.12	60.63
CDY02939	Canola	cytosol	47.81	60.47
CDX76094	Canola	cytosol	47.81	60.24
CDY40220	Canola	cytosol	33.44	47.98
CDY53690	Canola	cytosol	24.69	39.3
CDY41233	Canola	cytosol, extracellular	19.69	36.84

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:1.2.4	MapMan:3.12.3
Gene3D:3.20.20.70	GO:A0A078CYW9	InterPro:Aldolase_TIM	EnsemblPlants:CDX82002	ProteinID:CDX82002	ProteinID:CDX82002.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00136980001	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171
PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF15	MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6142
MetaCyc:PWY-7003	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase
InterPro:Triosephosphate_isomerase_AS	UniPathway:UPA00109	UniPathway:UPA00138	UniParc:UPI0004EDBFFF	SEG:seg	:

Description

BnaC08g35990D

Coordinates

chrLK031826:-:1852279..1854532

Molecular Weight (calculated)

34012.4 Da

IEP (calculated)

6.887

GRAVY (calculated)

-0.053

Length

320 amino acids

Sequence
(BLAST)

001: MASSLTAQIS CGTQPSAPSF SGLRRTCPKL DAAISFSHQS FCNRVNSSIR LVSSSNRSPR GVVAMAGSGK FFVGGNWKCN GTKDSIAKLV SDLNSASLEA
101: DVDVVVSPPF VYIDQVKSSL TDLIEISGQN SWVGKGGAFT GEISVEQLKD IGCKWVILGH SERRHVIGEK DEFIGKKAAY ALSEGLGVIA CIGEKLEERE
201: AGKTFDVCFE QLKAFADAVP SWEKVVVAYE PVWAIGTGKV ASPQQAQEVH VAVRDWLKKN VSEEVASKTR IIYGGSVNGG NCAELAKEED IDGFLVGGAS
301: LKGPEFATIV NSVTSKKVTA

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.