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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021310_P001 Maize extracellular 94.74 94.74
Zm00001d006221_P001 Maize plastid 88.82 90.6
Os09t0535000-02 Rice extracellular 87.83 87.83
TraesCS5D01G331100.1 Wheat plastid 81.25 82.61
TraesCS5B01G324800.1 Wheat plastid 81.25 82.61
HORVU5Hr1G082630.5 Barley plastid 81.58 82.12
TraesCS5A01G324200.1 Wheat plastid 81.25 82.06
GSMUA_Achr9P24140_001 Banana plastid 75.33 75.58
GSMUA_Achr3P26710_001 Banana plastid 74.34 72.67
Solyc10g054870.1.1 Tomato plastid 72.7 70.83
KRH19958 Soybean plastid 71.05 70.82
KRH32560 Soybean nucleus, plastid 70.39 70.39
KRG96044 Soybean nucleus 70.72 69.58
PGSC0003DMT400011335 Potato plastid 72.37 68.97
KRH67765 Soybean extracellular, nucleus, plastid 70.07 68.93
CDY15911 Canola plastid 70.39 68.59
CDX99612 Canola plastid 70.39 68.59
Bra030316.1-P Field mustard plastid 70.07 68.27
Solyc01g111120.2.1 Tomato plastid 72.37 67.48
VIT_03s0038g01780.t01 Wine grape plastid 71.71 67.28
PGSC0003DMT400004042 Potato cytosol, plastid 72.04 67.18
CDY13836 Canola plastid 70.07 66.56
CDX82002 Canola plastid 70.07 66.56
Bra031167.1-P Field mustard plastid 70.07 66.56
AT2G21170.3 Thale cress plastid 68.42 66.03
KXG33676 Sorghum cytosol, plastid 51.97 61.72
EES00320 Sorghum cytosol, plastid 53.62 53.44
Protein Annotations
KEGG:00010+5.3.1.1KEGG:00051+5.3.1.1KEGG:00562+5.3.1.1KEGG:00710+5.3.1.1MapMan:1.2.4MapMan:3.12.3
Gene3D:3.20.20.70EntrezGene:8063311InterPro:Aldolase_TIMUniProt:C5X695EnsemblPlants:EER99254ProteinID:EER99254
ProteinID:EER99254.1GO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0004807GO:GO:0005575
GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005829
GO:GO:0005975GO:GO:0006091GO:GO:0006094GO:GO:0006096GO:GO:0006139GO:GO:0006629
GO:GO:0006642GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058
GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009579GO:GO:0009658GO:GO:0009941
GO:GO:0009987GO:GO:0016043GO:GO:0019563GO:GO:0032504GO:GO:0046166GO:GO:0048046
GO:GO:0080022InterPro:IPR000652InterPro:IPR013785HAMAP:MF_00147_BPFAM:PF00121ScanProsite:PS00171
PFscan:PS51440PANTHER:PTHR21139PANTHER:PTHR21139:SF15MetaCyc:PWY-1042MetaCyc:PWY-5484MetaCyc:PWY-6142
MetaCyc:PWY-7003EnsemblPlantsGene:SORBI_3002G277100SUPFAM:SSF51351unigene:Sbi.204TIGRFAMs:TIGR00419InterPro:TIM_sf
InterPro:TrioseP_Isoase_bac/eukInterPro:Triosephosphate_isomeraseInterPro:Triosephosphate_isomerase_ASUniParc:UPI0001A83D7DRefSeq:XP_002462733.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:65971938..65975798
Molecular Weight (calculated)
32362.6 Da
IEP (calculated)
6.915
GRAVY (calculated)
0.047
Length
304 amino acids
Sequence
(BLAST)
001: MAAAPSSLAS SHLSRLADLR RAAAVATPAV PQQLRIGCSR RRAQRVVAMA GSGKFFVGGN WKCNGTKDSI SKLVSELNAA TLETDVDVVV APPFIYIDQV
101: KNSLTGRIEV SAQNVWIGKG GAYTGEISAE QLVDIGVQWV ILGHSERRHI IGEDDEFIGK KAAYALSQNV KLIACIGELL EEREAGKTFD VCFTQMKAFA
201: DSISNWADVV IAYEPVWAIG TGKVATPEQA QEVHAAVRDW LKTNVSPEVA SSTRIIYGGS VNAANCAELA KKEDIDGFLV GGASLKAPDF ATIVNSVTAK
301: KVTA
Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)
001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA
Arabidopsis Description
TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.