Factsheet for Bra031167.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13836	Canola	plastid	98.44	98.44
CDX82002	Canola	plastid	98.12	98.12
Bra030316.1-P	Field mustard	plastid	94.69	97.12
AT2G21170.3	Thale cress	plastid	89.69	91.11
Solyc10g054870.1.1	Tomato	plastid	77.19	79.17
KRG96044	Soybean	nucleus	76.25	78.96
KRH67765	Soybean	extracellular, nucleus, plastid	75.94	78.64
KRH32560	Soybean	nucleus, plastid	74.69	78.62
KRH19958	Soybean	plastid	74.69	78.36
PGSC0003DMT400011335	Potato	plastid	76.88	77.12
Solyc01g111120.2.1	Tomato	plastid	76.88	75.46
VIT_03s0038g01780.t01	Wine grape	plastid	75.94	75.0
GSMUA_Achr9P24140_001	Banana	plastid	70.94	74.92
PGSC0003DMT400004042	Potato	cytosol, plastid	76.25	74.85
TraesCS5B01G324800.1	Wheat	plastid	68.44	73.24
TraesCS5D01G331100.1	Wheat	plastid	68.44	73.24
GSMUA_Achr3P26710_001	Banana	plastid	70.62	72.67
TraesCS5A01G324200.1	Wheat	plastid	68.12	72.43
HORVU5Hr1G082630.5	Barley	plastid	67.81	71.85
Zm00001d006221_P001	Maize	plastid	66.25	71.14
Os09t0535000-02	Rice	extracellular	66.56	70.07
EER99254	Sorghum	plastid	66.56	70.07
Zm00001d021310_P001	Maize	extracellular	65.0	68.42
Bra014743.1-P	Field mustard	cytosol	47.5	59.84
Bra014744.1-P	Field mustard	cytosol	47.19	59.45
Bra007163.1-P	Field mustard	cytosol	27.19	45.31
Bra003214.1-P	Field mustard	cytosol	24.69	39.3

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:1.2.4	MapMan:3.12.3
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	EnsemblPlantsGene:Bra031167	EnsemblPlants:Bra031167.1	EnsemblPlants:Bra031167.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004807	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016853
InterPro:IPR000652	InterPro:IPR013785	UniProt:M4EQU4	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171
PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF15	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf
InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI00025428E2	SEG:seg	:

Description

AT2G21170 (E=1e-150) TIM | TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase

Coordinates

chrA09:+:32216093..32217911

Molecular Weight (calculated)

33983.3 Da

IEP (calculated)

7.247

GRAVY (calculated)

-0.077

Length

320 amino acids

Sequence
(BLAST)

001: MASSLTAQIS CGTQPSAPSF SGLRRTCPKL DAAVSFSHQP FCNRVNSSIR LVSSSNRSPR GVVAMAGSGK FFVGGNWKCN GTKDSIAKLV SDLNSASLEA
101: DVDVVVSPPF VYIDQVKSSL TDRIEISGQN SWVGKGGAFT GEISVEQLKD IGCKWVILGH SERRHVIGEK DEFIGKKAAY ALSEGLGVIA CIGEKLEERE
201: AGKTFDVCFD QLKAFADAVP SWDKVVVAYE PVWAIGTGKV ASPQQAQEVP VAVRDWLKKN VSEEVASKTR IIYGGSVNGG NCAELAKEED IDGFLVGGAS
301: LKGPEFATIV NSVTSKKVTA

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.