Factsheet for Bra030316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15911	Canola	plastid	99.68	99.68
Bra031167.1-P	Field mustard	plastid	97.12	94.69
AT2G21170.3	Thale cress	plastid	91.03	90.16
Solyc10g054870.1.1	Tomato	plastid	79.49	79.49
KRG96044	Soybean	nucleus	78.21	78.96
KRH67765	Soybean	extracellular, nucleus, plastid	78.21	78.96
KRH32560	Soybean	nucleus, plastid	76.92	78.95
KRH19958	Soybean	plastid	76.6	78.36
PGSC0003DMT400011335	Potato	plastid	78.85	77.12
GSMUA_Achr9P24140_001	Banana	plastid	73.08	75.25
Solyc01g111120.2.1	Tomato	plastid	78.53	75.15
PGSC0003DMT400004042	Potato	cytosol, plastid	78.21	74.85
VIT_03s0038g01780.t01	Wine grape	plastid	77.56	74.69
TraesCS5B01G324800.1	Wheat	plastid	70.83	73.91
TraesCS5D01G331100.1	Wheat	plastid	70.51	73.58
GSMUA_Achr3P26710_001	Banana	plastid	72.76	72.99
TraesCS5A01G324200.1	Wheat	plastid	70.19	72.76
HORVU5Hr1G082630.5	Barley	plastid	69.87	72.19
Zm00001d006221_P001	Maize	plastid	68.27	71.48
Os09t0535000-02	Rice	extracellular	68.91	70.72
EER99254	Sorghum	plastid	68.27	70.07
Zm00001d021310_P001	Maize	extracellular	67.31	69.08
Bra014743.1-P	Field mustard	cytosol	49.36	60.63
Bra014744.1-P	Field mustard	cytosol	49.04	60.24
Bra007163.1-P	Field mustard	cytosol	28.21	45.83
Bra003214.1-P	Field mustard	cytosol	25.32	39.3

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:1.2.4	MapMan:3.12.3
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	EnsemblPlantsGene:Bra030316	EnsemblPlants:Bra030316.1	EnsemblPlants:Bra030316.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004807	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	InterPro:IPR000652
InterPro:IPR013785	UniProt:M4ENE6	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440
PANTHER:PTHR21139	PANTHER:PTHR21139:SF15	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk
InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI0002543C3E	SEG:seg	:	:

Description

AT2G21170 (E=5e-137) TIM | TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase

Coordinates

chrA04:-:9148443..9150029

Molecular Weight (calculated)

33145.3 Da

IEP (calculated)

7.373

GRAVY (calculated)

-0.084

Length

312 amino acids

Sequence
(BLAST)

001: MASSLTAAGT QPSAPSFSGL RRTCPKLDAA VSFSHRVNSS IRLVSSSQRS PRGVVAMAGS GKFFVGGNWK CNGTKDTITK LVSDLNTATL ESDVDVVVSP
101: PFVYIDQVKS SLTDRIEISG QNSWVGKGGA FTGEISVEQL KDIGCKWVIL GHSERRHVIG EKDEFIGKKA AYALSEGLGV IACIGEKLEE REAGKTFDVC
201: FDQLKAFADA VPSWDKVVVA YEPVWAIGTG KVASPQQAQE VHVAVRDWLK KNVSEEVASK TRIIYGGSVN GGNCAELAKE EDIDGFLVGG ASLKGPEFAT
301: IVNSVTSKKV AA

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.