Factsheet for GSMUA_Achr3P26710_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P24140_001	Banana	plastid	85.85	88.12
TraesCS5B01G324800.1	Wheat	plastid	72.99	75.92
Zm00001d006221_P001	Maize	plastid	72.35	75.5
TraesCS5A01G324200.1	Wheat	plastid	72.99	75.42
Os09t0535000-02	Rice	extracellular	73.31	75.0
TraesCS5D01G331100.1	Wheat	plastid	72.03	74.92
HORVU5Hr1G082630.5	Barley	plastid	72.67	74.83
EER99254	Sorghum	plastid	72.67	74.34
KRH67765	Soybean	extracellular, nucleus, plastid	73.31	73.79
KRG96044	Soybean	nucleus	73.31	73.79
KRH32560	Soybean	nucleus, plastid	72.03	73.68
VIT_03s0038g01780.t01	Wine grape	plastid	76.53	73.46
CDX99612	Canola	plastid	73.31	73.08
CDY15911	Canola	plastid	73.31	73.08
Zm00001d021310_P001	Maize	extracellular	71.38	73.03
KRH19958	Soybean	plastid	71.38	72.79
Bra030316.1-P	Field mustard	plastid	72.99	72.76
Solyc10g054870.1.1	Tomato	plastid	71.7	71.47
CDY13836	Canola	plastid	72.99	70.94
Bra031167.1-P	Field mustard	plastid	72.67	70.62
CDX82002	Canola	plastid	72.35	70.31
AT2G21170.3	Thale cress	plastid	70.74	69.84
Solyc01g111120.2.1	Tomato	plastid	72.67	69.33
PGSC0003DMT400011335	Potato	plastid	71.06	69.28
PGSC0003DMT400004042	Potato	cytosol, plastid	72.03	68.71
GSMUA_Achr5P28700_001	Banana	cytosol	50.48	61.81
GSMUA_Achr11P...	Banana	plasma membrane	50.16	61.42
GSMUA_Achr9P03330_001	Banana	cytosol	50.16	59.54
GSMUA_AchrUn_...	Banana	cytosol	34.41	46.12

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:1.2.4	MapMan:3.12.3
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G26710_001	EnsemblPlants:GSMUA_Achr3P26710_001	EnsemblPlants:GSMUA_Achr3T26710_001	InterPro:IPR000652
InterPro:IPR013785	UniProt:M0SI37	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440
PANTHER:PTHR21139	PANTHER:PTHR21139:SF15	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk
InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI0002951D55	SEG:seg	:	:

Description

Triosephosphate isomerase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G26710_001]

Coordinates

chr3:+:26448005..26456562

Molecular Weight (calculated)

33523.2 Da

IEP (calculated)

8.125

GRAVY (calculated)

-0.032

Length

311 amino acids

Sequence
(BLAST)

001: MAAAAAASSL ATQVSGLRRE VLSRESAPPT ALFLRSVHSR LRLPSIRRPH RGVVAMAGTG KFFVGGNWKC NGTKDSITKL VADLNDAKLE NDVDIVVAPP
101: YIYADQVKQS LTDRIEISAQ NCWVGKGGAF TGEISAEQLI DIGCKWVILG HSERRHIIGE DDQFIGKKAA FALSQNLKVI ACIGEKLEER EAGKTFDVCF
201: QQMKAFADSI SNWMDVVIAY EPVWAIGTGK VATPQQAQEV HAALRDWLKK NVSAEVASFT RIIYGGSVNG SNCSELAKQE DIDGFLVGGA SLKGPEFAII
301: VNSVTSKKVA A

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.