CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15911	Canola	plastid	98.4	98.4
CDY13836	Canola	plastid	97.12	94.69
CDX82002	Canola	plastid	95.83	93.44
AT2G21170.3	Thale cress	plastid	90.71	89.84
KRH67765	Soybean	extracellular, nucleus, plastid	78.85	79.61
KRG96044	Soybean	nucleus	78.85	79.61
Solyc10g054870.1.1	Tomato	plastid	79.17	79.17
KRH19958	Soybean	plastid	77.24	79.02
KRH32560	Soybean	nucleus, plastid	76.92	78.95
PGSC0003DMT400011335	Potato	plastid	78.85	77.12
GSMUA_Achr9P24140_001	Banana	plastid	73.4	75.58
Solyc01g111120.2.1	Tomato	plastid	78.53	75.15
VIT_03s0038g01780.t01	Wine grape	plastid	77.88	75.0
PGSC0003DMT400004042	Potato	cytosol, plastid	78.21	74.85
TraesCS5B01G324800.1	Wheat	plastid	70.83	73.91
GSMUA_Achr3P26710_001	Banana	plastid	73.08	73.31
TraesCS5D01G331100.1	Wheat	plastid	70.19	73.24
TraesCS5A01G324200.1	Wheat	plastid	70.19	72.76
HORVU5Hr1G082630.5	Barley	plastid	70.19	72.52
Zm00001d006221_P001	Maize	plastid	68.59	71.81
Os09t0535000-02	Rice	extracellular	69.55	71.38
EER99254	Sorghum	plastid	68.59	70.39
Zm00001d021310_P001	Maize	extracellular	67.63	69.41
CDY02937	Canola	cytosol	49.68	61.02
CDX76095	Canola	cytosol	49.36	60.63
CDY02939	Canola	cytosol	49.04	60.47
CDX76094	Canola	cytosol	49.04	60.24
CDY40220	Canola	cytosol	34.29	47.98
CDY53690	Canola	cytosol	25.32	39.3
CDY41233	Canola	cytosol, extracellular	20.19	36.84

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:1.2.4	MapMan:3.12.3
Gene3D:3.20.20.70	GO:A0A078EEZ6	InterPro:Aldolase_TIM	EnsemblPlants:CDX99612	ProteinID:CDX99612	ProteinID:CDX99612.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00108116001	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171
PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF15	MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6142
MetaCyc:PWY-7003	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase
InterPro:Triosephosphate_isomerase_AS	UniPathway:UPA00109	UniPathway:UPA00138	UniParc:UPI0001CAB942	SEG:seg	:

Description

BnaC04g33690D

Coordinates

chrLK031912:+:343689..345688

Molecular Weight (calculated)

33171.4 Da

IEP (calculated)

7.373

GRAVY (calculated)

-0.070

Length

312 amino acids

Sequence
(BLAST)

001: MASSLTAAGT QPSAPSFSGL RRTCLKLEAA VSFSHRVNSS IRLVSSSQRS PRGVVAMAGS GKFFVGGNWK CNGTKDSITK LVSDLNTATL EPDVDVVVSP
101: PFVYIDQVKS SLTDRIEISG QNSWVGKGGA FTGEISVEQL KDIGCKWVIL GHSERRHVIG EKDEFIGKKA AYALSEGLGV IACIGEKLEE REAGKTFDVC
201: FDQLKAFADA VPSWDKVVVA YEPVWAIGTG KVASPQQAQE VHVAVRDWLK KNVSEEVASK TRIIYGGSVN GGNCAELAKE EDIDGFLVGG ASLKGPEFAT
301: IVNSVTSKKV AA

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.