CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003214.1-P	Field mustard	cytosol	100.0	100.0
CDY41233	Canola	cytosol, extracellular	42.29	49.71
CDY02939	Canola	cytosol	56.22	44.66
CDX76095	Canola	cytosol	56.22	44.49
CDX76094	Canola	cytosol	55.72	44.09
CDY02937	Canola	cytosol	55.72	44.09
AT3G55440.1	Thale cress	cytosol	55.72	44.09
PGSC0003DMT400071330	Potato	cytosol, extracellular	51.74	40.94
CDY40220	Canola	cytosol	43.78	39.46
Solyc04g011510.2.1	Tomato	plastid	50.75	39.38
TraesCS3B01G392000.1	Wheat	cytosol	48.26	39.27
GSMUA_Achr11P...	Banana	plasma membrane	49.25	38.98
TraesCS3A01G359400.1	Wheat	golgi	48.76	38.28
Zm00001d012407_P004	Maize	cytosol	48.26	37.89
GSMUA_Achr5P28700_001	Banana	cytosol	47.76	37.8
Zm00001d009835_P001	Maize	cytosol	24.38	37.69
KXG33676	Sorghum	cytosol, plastid	47.76	37.5
TraesCS3D01G073000.1	Wheat	golgi	46.77	37.15
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	46.77	37.01
Os01t0841600-01	Rice	cytosol	45.27	35.69
GSMUA_AchrUn_...	Banana	cytosol	36.82	31.9
HORVU3Hr1G013350.1	Barley	extracellular, plastid	47.26	31.15
Zm00001d029307_P001	Maize	cytosol	23.38	27.33
CDY15911	Canola	plastid	39.3	25.32
CDX99612	Canola	plastid	39.3	25.32
CDY13836	Canola	plastid	39.3	24.69
CDX82002	Canola	plastid	39.3	24.69

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	Gene3D:3.20.20.70	MapMan:50.5.3
GO:A0A078IRK8	UniProt:A0A078IRK8	InterPro:Aldolase_TIM	EnsemblPlants:CDY53690	ProteinID:CDY53690	ProteinID:CDY53690.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00011246001
InterPro:IPR000652	InterPro:IPR013785	PFAM:PF00121	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF16
MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7003	SUPFAM:SSF51351	InterPro:TIM_sf
InterPro:Triosephosphate_isomerase	UniPathway:UPA00109	UniPathway:UPA00138	UniParc:UPI00025414B3	SEG:seg	:

Description

BnaA07g37840DBnaA07g37840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRK8]

Coordinates

chrLK033228:-:32947..34164

Molecular Weight (calculated)

22249.3 Da

IEP (calculated)

6.849

GRAVY (calculated)

0.276

Length

201 amino acids

Sequence
(BLAST)

001: MLVNLDMPWF ILGHSERRAL LNESNEFFGD KVAYALAQGL KVIACVGETL EQREAGSTMD VVAAQTKAIA VLVSTRSTCI ATLVRQYMIG VELVKCCHRL
101: WTSADHLNRK LPQLKLRKKW LAKNVGEDVA ATTHIIYGGS VNSGNCQELD GQTDVDGFLV GGASLKVHIL CSDLLVCFNQ YHYLMCLLSL LLLHPEFIDI
201: I

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.