Factsheet for TraesCS3A01G359400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G392000.1	Wheat	cytosol	93.36	96.76
Zm00001d012407_P004	Maize	cytosol	92.58	92.58
KXG33676	Sorghum	cytosol, plastid	92.19	92.19
Os01t0841600-01	Rice	cytosol	90.62	90.98
VIT_06s0004g04800.t01	Wine grape	cytosol	80.86	81.5
GSMUA_Achr5P28700_001	Banana	cytosol	80.86	81.5
KRH10260	Soybean	nucleus	80.47	81.42
Solyc06g005490.2.1	Tomato	plastid	80.86	80.54
KRH23071	Soybean	cytosol, nucleus	66.41	80.19
CDY02939	Canola	cytosol	78.52	79.45
Bra014743.1-P	Field mustard	cytosol	78.52	79.13
CDX76094	Canola	cytosol	78.52	79.13
CDX76095	Canola	cytosol	78.52	79.13
GSMUA_Achr11P...	Banana	plasma membrane	78.52	79.13
GSMUA_Achr9P03330_001	Banana	cytosol	80.86	79.01
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	78.12	78.74
CDY02937	Canola	cytosol	77.73	78.35
Bra014744.1-P	Field mustard	cytosol	77.73	78.35
AT3G55440.1	Thale cress	cytosol	77.34	77.95
PGSC0003DMT400071330	Potato	cytosol, extracellular	76.17	76.77
TraesCS3A01G073300.1	Wheat	cytosol, unclear	75.78	76.68
Solyc04g011510.2.1	Tomato	plastid	72.66	71.81
Zm00001d009835_P001	Maize	cytosol	33.98	66.92
GSMUA_AchrUn_...	Banana	cytosol	55.08	60.78
CDY40220	Canola	cytosol	51.95	59.64
Bra007163.1-P	Field mustard	cytosol	39.45	52.6
TraesCS5A01G324200.1	Wheat	plastid	59.77	50.83
Bra003214.1-P	Field mustard	cytosol	38.28	48.76
CDY53690	Canola	cytosol	38.28	48.76
Zm00001d029307_P001	Maize	cytosol	31.64	47.09
CDY41233	Canola	cytosol, extracellular	31.25	46.78

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:2.1.1.3	MapMan:3.1.2.1
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B	PFAM:PF00121
ScanProsite:PS00171	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF14	SUPFAM:SSF51351	TIGRFAMs:TIGR00419
InterPro:TIM_sf	EnsemblPlantsGene:TraesCS3A01G359400	EnsemblPlants:TraesCS3A01G359400.1	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS
TIGR:cd00311	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:607443535..607446516

Molecular Weight (calculated)

27299.6 Da

IEP (calculated)

5.141

GRAVY (calculated)

0.046

Length

256 amino acids

Sequence
(BLAST)

001: MAPRKFFVGG NWKCNGTGDD VKKIVTFLNE AEVPSEDAVE VVVSPPFVFL QQAKGLLRPD FAVAAQNCWV RKGGAFTGEI SAEMLVNLQV PWVILGHSER
101: RALLNESNDF VADKVAYALA QGLKVIACIG ETLEQREAGT TMEVVSAQTK AIAEKTSDWT NVVLAYEPVW AIGTGKVASP AQAQEVHDGL RKWLHANVGP
201: AVAESTRIIY GGSVNGANCK ELAAQPDLDG FLVGGASLKP EFVDIIKSAT VKSSSA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.