Factsheet for Zm00001d012407_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33676	Sorghum	cytosol, plastid	97.27	97.27
Os01t0841600-01	Rice	cytosol	92.97	93.33
TraesCS3B01G392000.1	Wheat	cytosol	89.45	92.71
TraesCS3A01G359400.1	Wheat	golgi	92.58	92.58
GSMUA_Achr5P28700_001	Banana	cytosol	82.42	83.07
VIT_06s0004g04800.t01	Wine grape	cytosol	82.03	82.68
Solyc06g005490.2.1	Tomato	plastid	82.03	81.71
GSMUA_Achr9P03330_001	Banana	cytosol	83.59	81.68
KRH10260	Soybean	nucleus	80.47	81.42
GSMUA_Achr11P...	Banana	plasma membrane	80.47	81.1
Zm00001d008619_P001	Maize	plastid	78.91	80.8
KRH23071	Soybean	cytosol, nucleus	66.8	80.66
CDY02939	Canola	cytosol	78.52	79.45
Zm00001d039865_P002	Maize	cytosol	80.08	79.15
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	78.52	79.13
CDX76095	Canola	cytosol	78.52	79.13
CDX76094	Canola	cytosol	78.52	79.13
Bra014743.1-P	Field mustard	cytosol	78.52	79.13
AT3G55440.1	Thale cress	cytosol	78.52	79.13
CDY02937	Canola	cytosol	78.12	78.74
PGSC0003DMT400071330	Potato	cytosol, extracellular	78.12	78.74
Bra014744.1-P	Field mustard	cytosol	77.73	78.35
Zm00001d040375_P001	Maize	cytosol	32.03	74.55
Zm00001d009835_P001	Maize	cytosol	37.5	73.85
Solyc04g011510.2.1	Tomato	plastid	74.22	73.36
GSMUA_AchrUn_...	Banana	cytosol	57.03	62.93
CDY40220	Canola	cytosol	52.34	60.09
Bra007163.1-P	Field mustard	cytosol	40.62	54.17
Zm00001d006221_P001	Maize	plastid	60.94	52.35
Zm00001d029307_P001	Maize	cytosol	34.77	51.74
Zm00001d021310_P001	Maize	extracellular	60.94	51.32
CDY53690	Canola	cytosol	37.89	48.26
Bra003214.1-P	Field mustard	cytosol	37.89	48.26
CDY41233	Canola	cytosol, extracellular	31.64	47.37
Zm00001d030216_P001	Maize	mitochondrion	36.72	36.29

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	EntrezGene:100280823	MapMan:2.1.1.3
MapMan:3.1.2.1	Gene3D:3.20.20.70	ProteinID:AQK99486.1	ProteinID:AQK99489.1	InterPro:Aldolase_TIM	UniProt:B6SMQ5
EMBL:BT064814	EMBL:EU954020	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016853	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B
PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF14	SUPFAM:SSF51351
TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI000182BD4A
EnsemblPlantsGene:Zm00001d012407	EnsemblPlants:Zm00001d012407_P004	EnsemblPlants:Zm00001d012407_T004	SEG:seg	:	:

Description

triose phosphate isomerase5 triose phosphate isomerase5

Coordinates

chr8:+:173978508..173987430

Molecular Weight (calculated)

27340.9 Da

IEP (calculated)

5.380

GRAVY (calculated)

0.147

Length

256 amino acids

Sequence
(BLAST)

001: MASRKFFVGG NWKCNGTGED VKKIVTVLNQ AEVPSEDVVE VVVSPPFVFL QQVKGLLRLD FAVAAQNCWV RKGGAFTGEI SAEMLVNLQV PWVILGHSER
101: RALLGESSDF VADKVAYALT QGLKVIACIG ETLEQREAGT TMDVVAAQTK AIAEKISDWT NIVLAYEPVW AIGTGKVATP AQAQEVHDGL RKWLHSNVSP
201: AVAELTRIIY GGSVNGANCK ELAAQPDVDG FLVGGASLKP EFVDIIKSAT VKSSSA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.