Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02937 | Canola | cytosol | 96.85 | 96.85 |
| CDY02939 | Canola | cytosol | 96.46 | 96.84 |
| CDX76094 | Canola | cytosol | 96.46 | 96.46 |
| CDX76095 | Canola | cytosol | 96.06 | 96.06 |
| Bra014743.1-P | Field mustard | cytosol | 95.67 | 95.67 |
| Bra014744.1-P | Field mustard | cytosol | 95.28 | 95.28 |
| PGSC0003DMT400071330 | Potato | cytosol, extracellular | 88.19 | 88.19 |
| VIT_13s0019g01090.t01 | Wine grape | cytosol, endoplasmic reticulum | 82.28 | 82.28 |
| Solyc04g011510.2.1 | Tomato | plastid | 83.86 | 82.24 |
| GSMUA_Achr5P28700_001 | Banana | cytosol | 81.5 | 81.5 |
| GSMUA_Achr11P... | Banana | plasma membrane | 81.5 | 81.5 |
| TraesCS3D01G073000.1 | Wheat | golgi | 79.13 | 79.45 |
| KXG33676 | Sorghum | cytosol, plastid | 79.53 | 78.91 |
| Zm00001d012407_P004 | Maize | cytosol | 79.13 | 78.52 |
| Os01t0841600-01 | Rice | cytosol | 78.74 | 78.43 |
| TraesCS3A01G359400.1 | Wheat | golgi | 77.95 | 77.34 |
| TraesCS3B01G392000.1 | Wheat | cytosol | 74.02 | 76.11 |
| CDY40220 | Canola | cytosol | 64.57 | 73.54 |
| Bra007163.1-P | Field mustard | cytosol | 50.39 | 66.67 |
| HORVU3Hr1G013350.1 | Barley | extracellular, plastid | 78.74 | 65.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.48 | 62.93 |
| Zm00001d009835_P001 | Maize | cytosol | 29.92 | 58.46 |
| Bra003214.1-P | Field mustard | cytosol | 44.09 | 55.72 |
| CDY53690 | Canola | cytosol | 44.09 | 55.72 |
| CDY41233 | Canola | cytosol, extracellular | 35.83 | 53.22 |
| AT2G21170.3 | Thale cress | plastid | 61.02 | 49.21 |
| Zm00001d029307_P001 | Maize | cytosol | 27.56 | 40.7 |
Protein Annotations
| KEGG:00010+5.3.1.1 | KEGG:00051+5.3.1.1 | KEGG:00562+5.3.1.1 | KEGG:00710+5.3.1.1 | MapMan:2.1.1.3 | MapMan:3.1.2.1 |
| Gene3D:3.20.20.70 | PDB:4OBT | EntrezGene:824710 | UniProt:A0A178VM57 | ProteinID:AEE79384.1 | EMBL:AF375426 |
| ArrayExpress:AT3G55440 | EnsemblPlantsGene:AT3G55440 | RefSeq:AT3G55440 | TAIR:AT3G55440 | RefSeq:AT3G55440-TAIR-G | EnsemblPlants:AT3G55440.1 |
| TAIR:AT3G55440.1 | Symbol:ATCTIMC | EMBL:AY074822 | InterPro:Aldolase_TIM | ProteinID:CAB75902.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004807 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006094 |
| GO:GO:0006096 | GO:GO:0006098 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009987 | GO:GO:0010043 |
| GO:GO:0016020 | GO:GO:0016853 | GO:GO:0019563 | GO:GO:0030312 | GO:GO:0044262 | GO:GO:0046166 |
| GO:GO:0046686 | GO:GO:0048046 | InterPro:IPR000652 | InterPro:IPR013785 | HAMAP:MF_00147_B | RefSeq:NP_191104.1 |
| ProteinID:OAP06345.1 | UniProt:P48491 | PFAM:PF00121 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00171 | PFscan:PS51440 | PANTHER:PTHR21139 |
| PANTHER:PTHR21139:SF16 | SUPFAM:SSF51351 | TIGRFAMs:TIGR00419 | InterPro:TIM_sf | InterPro:TrioseP_Isoase_bac/euk | InterPro:Triosephosphate_isomerase |
| InterPro:Triosephosphate_isomerase_AS | EMBL:U02949 | UniParc:UPI0000000EEC | SEG:seg | : | : |
Description
CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
Coordinates
chr3:+:20553403..20556560
Molecular Weight (calculated)
27170.5 Da
IEP (calculated)
5.167
GRAVY (calculated)
0.076
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.