CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007163.1-P	Field mustard	cytosol	74.89	86.98
CDY02939	Canola	cytosol	73.99	65.22
CDX76094	Canola	cytosol	73.99	64.96
CDX76095	Canola	cytosol	73.99	64.96
CDY02937	Canola	cytosol	73.99	64.96
AT3G55440.1	Thale cress	cytosol	73.54	64.57
PGSC0003DMT400071330	Potato	cytosol, extracellular	65.47	57.48
Solyc04g011510.2.1	Tomato	plastid	64.13	55.21
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	61.88	54.33
GSMUA_Achr5P28700_001	Banana	cytosol	61.44	53.94
GSMUA_Achr11P...	Banana	plasma membrane	60.99	53.54
KXG33676	Sorghum	cytosol, plastid	60.54	52.73
Zm00001d012407_P004	Maize	cytosol	60.09	52.34
Os01t0841600-01	Rice	cytosol	59.64	52.16
TraesCS3A01G359400.1	Wheat	golgi	59.64	51.95
TraesCS3D01G073000.1	Wheat	golgi	58.74	51.78
Zm00001d009835_P001	Maize	cytosol	30.04	51.54
TraesCS3B01G392000.1	Wheat	cytosol	55.61	50.2
CDY53690	Canola	cytosol	39.46	43.78
HORVU3Hr1G013350.1	Barley	extracellular, plastid	58.3	42.62
CDY41233	Canola	cytosol, extracellular	30.94	40.35
GSMUA_AchrUn_...	Banana	cytosol	40.36	38.79
Zm00001d029307_P001	Maize	cytosol	27.8	36.05
CDY15911	Canola	plastid	48.43	34.62
CDX99612	Canola	plastid	47.98	34.29
CDX82002	Canola	plastid	47.98	33.44
CDY13836	Canola	plastid	47.98	33.44

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	Gene3D:3.20.20.70	MapMan:50.5.3
GO:A0A078HNT9	UniProt:A0A078HNT9	InterPro:Aldolase_TIM	EnsemblPlants:CDY40220	ProteinID:CDY40220	ProteinID:CDY40220.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00069370001
InterPro:IPR000652	InterPro:IPR013785	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440	PANTHER:PTHR21139
PANTHER:PTHR21139:SF16	MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7003	SUPFAM:SSF51351
InterPro:TIM_sf	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniPathway:UPA00109	UniPathway:UPA00138	UniParc:UPI0004EDD3EA
SEG:seg	:	:	:	:	:

Description

BnaA09g35020DBnaA09g35020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNT9]

Coordinates

chrLK032466:+:145401..147479

Molecular Weight (calculated)

24281.0 Da

IEP (calculated)

4.486

GRAVY (calculated)

0.107

Length

223 amino acids

Sequence
(BLAST)

001: MFGAEIIERQ FPMNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LKGGAFTGEM LVNLDIPWVI LGHSERRALL NESNEFVGDK VAYALAQEAG
101: STMDVVAAQT KAIADRVSNW SNVVIAYEPV WAIGTGKVAS PAQTQEVSCF LCVYDELRKW LAKNVSDDVA ATTHIIYRED PLNGGNFKEL GGQADVDGFL
201: VGGASLKLHL YCVLSFVCFS QNH

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.