Factsheet for Bra014743.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76094	Canola	cytosol	99.21	99.21
Bra014744.1-P	Field mustard	cytosol	98.82	98.82
AT3G55440.1	Thale cress	cytosol	95.67	95.67
PGSC0003DMT400071330	Potato	cytosol, extracellular	87.8	87.8
VIT_13s0019g01090.t01	Wine grape	cytosol, endoplasmic reticulum	83.46	83.46
GSMUA_Achr11P...	Banana	plasma membrane	82.68	82.68
GSMUA_Achr5P28700_001	Banana	cytosol	82.68	82.68
Solyc04g011510.2.1	Tomato	plastid	83.46	81.85
TraesCS3D01G073000.1	Wheat	golgi	79.13	79.45
KXG33676	Sorghum	cytosol, plastid	79.53	78.91
Os01t0841600-01	Rice	cytosol	79.13	78.82
Zm00001d012407_P004	Maize	cytosol	79.13	78.52
TraesCS3A01G359400.1	Wheat	golgi	79.13	78.52
TraesCS3B01G392000.1	Wheat	cytosol	74.41	76.52
Bra007163.1-P	Field mustard	cytosol	50.39	66.67
HORVU3Hr1G013350.1	Barley	extracellular, plastid	78.74	65.57
GSMUA_AchrUn_...	Banana	cytosol	58.66	64.22
Zm00001d009835_P001	Maize	cytosol	30.32	59.23
Bra003214.1-P	Field mustard	cytosol	43.7	55.22
Bra030316.1-P	Field mustard	plastid	60.63	49.36
Bra031167.1-P	Field mustard	plastid	59.84	47.5
Zm00001d029307_P001	Maize	cytosol	27.95	41.28

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:2.1.1.3	MapMan:3.1.2.1
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	EnsemblPlantsGene:Bra014743	EnsemblPlants:Bra014743.1	EnsemblPlants:Bra014743.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004807	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	InterPro:IPR000652
InterPro:IPR013785	UniProt:M4DE24	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440
PANTHER:PTHR21139	PANTHER:PTHR21139:SF16	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk
InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI0002544B19	SEG:seg	:	:

Description

AT3G55440 (E=6e-127) ATCTIMC, TPI | TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase

Coordinates

chrA04:-:2737021..2739220

Molecular Weight (calculated)

27282.7 Da

IEP (calculated)

5.426

GRAVY (calculated)

0.046

Length

254 amino acids

Sequence
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP MVKSILRPDF YVAAQNCWVK KGGAFTGEVS AEMLVNLEIP WVILGHSERR
101: ALLNETNEFV GDKVAYALAQ GLKVIACVGE TLEQRESGST MDVVAAQTKA IADRVSNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.