Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009835_P001 | Maize | cytosol | 60.91 | 51.54 |
| Zm00001d039865_P002 | Maize | cytosol | 89.09 | 37.84 |
| TraesCS3A01G073300.1 | Wheat | cytosol, unclear | 85.45 | 37.15 |
| TraesCS3D01G073000.1 | Wheat | golgi | 85.45 | 37.15 |
| TraesCS3B01G087400.1 | Wheat | cytosol, golgi, unclear | 84.55 | 36.76 |
| Zm00001d008619_P001 | Maize | plastid | 82.73 | 36.4 |
| Zm00001d029307_P001 | Maize | cytosol | 54.55 | 34.88 |
| Os01t0147900-01 | Rice | extracellular | 80.0 | 34.78 |
| Zm00001d030216_P001 | Maize | mitochondrion | 78.18 | 33.2 |
| Zm00001d012407_P004 | Maize | cytosol | 74.55 | 32.03 |
| EES00320 | Sorghum | cytosol, plastid | 87.27 | 31.48 |
| HORVU3Hr1G013350.1 | Barley | extracellular, plastid | 85.45 | 30.82 |
| Zm00001d006221_P001 | Maize | plastid | 65.45 | 24.16 |
| Zm00001d021310_P001 | Maize | extracellular | 65.45 | 23.68 |
Protein Annotations
| KEGG:00010+5.3.1.1 | KEGG:00051+5.3.1.1 | KEGG:00562+5.3.1.1 | KEGG:00710+5.3.1.1 | Gene3D:3.20.20.70 | MapMan:50.5.3 |
| UniProt:A0A1D6MQG5 | InterPro:Aldolase_TIM | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004807 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016853 | InterPro:IPR000652 | InterPro:IPR013785 | ProteinID:ONM31255.1 | PFAM:PF00121 |
| ScanProsite:PS00171 | PFscan:PS51440 | PANTHER:PTHR21139 | PANTHER:PTHR21139:SF6 | SUPFAM:SSF51351 | InterPro:TIM_sf |
| InterPro:Triosephosphate_isomerase | InterPro:Triosephosphate_isomerase_AS | UniParc:UPI000844C260 | EnsemblPlantsGene:Zm00001d040375 | EnsemblPlants:Zm00001d040375_P001 | EnsemblPlants:Zm00001d040375_T001 |
Description
Triosephosphate isomerase cytosolic
Coordinates
chr3:-:40750419..40751111
Molecular Weight (calculated)
11773.1 Da
IEP (calculated)
5.050
GRAVY (calculated)
0.160
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQMVVCFTK KIKDWSNVVV AYEPVWAIGT GKVATVAQAQ EVHASLRDWL KTNVSPEVAE STRIFYGGSV TAANCKELAA QPDVDGFLVG GASLKPEFID
101: IINAATVKSA
101: IINAATVKSA
001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA
Arabidopsis Description
CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.