Factsheet for TraesCS3B01G087400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, unclear
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G073300.1	Wheat	cytosol, unclear	98.42	98.42
TraesCS3D01G073000.1	Wheat	golgi	97.23	97.23
Os01t0147900-01	Rice	extracellular	86.56	86.56
Zm00001d039865_P002	Maize	cytosol	87.75	85.71
Zm00001d008619_P001	Maize	plastid	84.19	85.2
Zm00001d040375_P001	Maize	cytosol	36.76	84.55
HORVU3Hr1G013350.1	Barley	extracellular, plastid	94.86	78.69
TraesCS3B01G392000.1	Wheat	cytosol	73.52	75.3
EES00320	Sorghum	cytosol, plastid	87.35	72.46
TraesCS5B01G324800.1	Wheat	plastid	61.26	51.84
Zm00001d030216_P001	Maize	mitochondrion	39.53	38.61

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:2.1.1.3	MapMan:3.1.2.1
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	InterPro:IPR000652	InterPro:IPR013785	HAMAP:MF_00147_B	PFAM:PF00121
ScanProsite:PS00171	PFscan:PS51440	PANTHER:PTHR21139	PANTHER:PTHR21139:SF16	SUPFAM:SSF51351	TIGRFAMs:TIGR00419
InterPro:TIM_sf	EnsemblPlantsGene:TraesCS3B01G087400	EnsemblPlants:TraesCS3B01G087400.1	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS
TIGR:cd00311	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:55456681..55459679

Molecular Weight (calculated)

26820.2 Da

IEP (calculated)

5.401

GRAVY (calculated)

0.115

Length

253 amino acids

Sequence
(BLAST)

001: MGRKFFVGGN WKCNGTVEQV ESIVNTLNAG QIASTDVVEV VVSPPYVFLP TVKAKLRPEI QVAAQNCWVK KGGAFTGEVS AEMLVNLGVP WVILGHSERR
101: SLMGESSEFV GEKVAYALAQ GLKVIACVGE TLEQREAGST MEVVAEQTKA ITGKIKDWTN VVVAYEPVWA IGTGKVATPA QAQEVHANLR DWLKTNVSPE
201: VAASTRIIYG GSVTGASCKE LAGQPDVDGF LVGGASLKPE FIDIINAATV KSA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.