Factsheet for Zm00001d039865_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008619_P001	Maize	plastid	91.89	95.2
Os01t0147900-01	Rice	extracellular	87.26	89.33
Zm00001d040375_P001	Maize	cytosol	37.84	89.09
TraesCS3A01G073300.1	Wheat	cytosol, unclear	86.49	88.54
TraesCS3D01G073000.1	Wheat	golgi	86.49	88.54
TraesCS3B01G087400.1	Wheat	cytosol, golgi, unclear	85.71	87.75
Zm00001d012407_P004	Maize	cytosol	79.15	80.08
EES00320	Sorghum	cytosol, plastid	94.21	80.0
HORVU3Hr1G013350.1	Barley	extracellular, plastid	86.49	73.44
Zm00001d009835_P001	Maize	cytosol	31.27	62.31
Zm00001d006221_P001	Maize	plastid	61.39	53.36
Zm00001d021310_P001	Maize	extracellular	61.39	52.3
Zm00001d029307_P001	Maize	cytosol	28.19	42.44
Zm00001d030216_P001	Maize	mitochondrion	40.93	40.93

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	EntrezGene:100272481	MapMan:2.1.1.3
MapMan:3.1.2.1	Gene3D:3.20.20.70	UniProt:A0A1D6MLF6	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824
GO:GO:0004807	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016853	InterPro:IPR000652
InterPro:IPR013785	HAMAP:MF_00147_B	ProteinID:ONM30043.1	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440
PANTHER:PTHR21139	PANTHER:PTHR21139:SF16	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk
InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI00084338B1	EnsemblPlantsGene:Zm00001d039865	EnsemblPlants:Zm00001d039865_P002	EnsemblPlants:Zm00001d039865_T002
SEG:seg	:	:	:	:	:

Description

triose phosphate isomerase4 triose phosphate isomerase4

Coordinates

chr3:+:17163334..17167131

Molecular Weight (calculated)

27749.2 Da

IEP (calculated)

5.153

GRAVY (calculated)

0.077

Length

259 amino acids

Sequence
(BLAST)

001: MGRKFFVGGN WKCNGTTDQV EKIVKTLNEG QVPPSDVVEV VVSPPYVFLP VVKSQLRQEF HVAAQNCWVK KGGAFTGEVS AEMLVNLGVP WVILGHSERR
101: ALLGESNEFV GDKVAYALSQ GLKVIACVGE TLEQREAGST MDVVAAQTKA IAEKIKDWSN VVVAYEPVWA IGTGKVATPA QAQEVSFFLE VHASLRDWLK
201: TNASPEVAES TRIIYGGSVT AANCKELAAQ PDVDGFLVGG ASLKPEFIDI INAATVKSA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.