Factsheet for GSMUA_Achr9P03330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28700_001	Banana	cytosol	82.82	85.43
KXG33676	Sorghum	cytosol, plastid	82.06	83.98
GSMUA_Achr11P...	Banana	plasma membrane	81.3	83.86
Zm00001d012407_P004	Maize	cytosol	81.68	83.59
Os01t0841600-01	Rice	cytosol	81.3	83.53
TraesCS3A01G359400.1	Wheat	golgi	79.01	80.86
TraesCS3B01G392000.1	Wheat	cytosol	75.57	80.16
TraesCS3D01G073000.1	Wheat	golgi	75.57	78.26
GSMUA_AchrUn_...	Banana	cytosol	58.78	66.38
Zm00001d009835_P001	Maize	cytosol	32.44	65.38
HORVU3Hr1G013350.1	Barley	extracellular, plastid	75.19	64.59
GSMUA_Achr9P24140_001	Banana	plastid	59.92	51.82
GSMUA_Achr3P26710_001	Banana	plastid	59.54	50.16
Zm00001d029307_P001	Maize	cytosol	29.01	44.19

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:2.1.1.3	MapMan:3.1.2.1
Gene3D:3.20.20.70	InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G03330_001	EnsemblPlants:GSMUA_Achr9P03330_001	EnsemblPlants:GSMUA_Achr9T03330_001	InterPro:IPR000652
InterPro:IPR013785	UniProt:M0TX42	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440
PANTHER:PTHR21139	PANTHER:PTHR21139:SF9	SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk
InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS	UniParc:UPI000296EA90	SEG:seg	:	:

Description

Triosephosphate isomerase, cytosolic [Source:GMGC_GENE;Acc:GSMUA_Achr9G03330_001]

Coordinates

chr9:+:2323044..2328654

Molecular Weight (calculated)

27991.6 Da

IEP (calculated)

5.376

GRAVY (calculated)

0.149

Length

262 amino acids

Sequence
(BLAST)

001: MARKFFVGGN WKCNGTVEQV KKIVTVLNEA EVPPEEVVDV VVSPPFVFLS LVKSLLRSDF QVAAQNCWAR KGGAFTGEVS AEMLVNLGIP WVILGHSERR
101: LLLGETNEAS FPYFVGDKVA YALSQGLKVI ACVGETLEQR ESGSTMDIVA AQTKAIAGNA SWISDWNNVV LAYEPVWAIG TGKVATPTQA QEVHTALRKL
201: LHDNVSPEVA ASTRIIYGGS VNGANCKELA AQPDVDGFLV GGASLKPEFV DIIKSATVKS SA

Best Arabidopsis Sequence Match ( AT3G55440.1 )
(BLAST)

001: MARKFFVGGN WKCNGTAEEV KKIVNTLNEA QVPSQDVVEV VVSPPYVFLP LVKSTLRSDF FVAAQNCWVK KGGAFTGEVS AEMLVNLDIP WVILGHSERR
101: AILNESSEFV GDKVAYALAQ GLKVIACVGE TLEEREAGST MDVVAAQTKA IADRVTNWSN VVIAYEPVWA IGTGKVASPA QAQEVHDELR KWLAKNVSAD
201: VAATTRIIYG GSVNGGNCKE LGGQADVDGF LVGGASLKPE FIDIIKAAEV KKSA

Arabidopsis Description

CTIMCTriosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.