CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32560	Soybean	nucleus, plastid	88.52	88.82
KRH67765	Soybean	extracellular, nucleus, plastid	80.0	78.96
KRG96044	Soybean	nucleus	79.67	78.64
AT2G21170.3	Thale cress	plastid	80.33	77.78
CDX99612	Canola	plastid	79.02	77.24
Bra030316.1-P	Field mustard	plastid	78.36	76.6
CDY15911	Canola	plastid	78.36	76.6
PGSC0003DMT400011335	Potato	plastid	79.67	76.18
Solyc01g111120.2.1	Tomato	plastid	81.31	76.07
PGSC0003DMT400004042	Potato	cytosol, plastid	80.98	75.77
Solyc10g054870.1.1	Tomato	plastid	77.38	75.64
CDY13836	Canola	plastid	79.34	75.62
VIT_03s0038g01780.t01	Wine grape	plastid	79.34	74.69
Bra031167.1-P	Field mustard	plastid	78.36	74.69
CDX82002	Canola	plastid	78.36	74.69
TraesCS5D01G331100.1	Wheat	plastid	71.8	73.24
GSMUA_Achr9P24140_001	Banana	plastid	72.46	72.94
Zm00001d006221_P001	Maize	plastid	71.15	72.82
TraesCS5B01G324800.1	Wheat	plastid	71.15	72.58
TraesCS5A01G324200.1	Wheat	plastid	71.48	72.43
Os09t0535000-02	Rice	extracellular	72.13	72.37
HORVU5Hr1G082630.5	Barley	plastid	71.15	71.85
Zm00001d021310_P001	Maize	extracellular	71.48	71.71
GSMUA_Achr3P26710_001	Banana	plastid	72.79	71.38
EER99254	Sorghum	plastid	70.82	71.05
KRH10260	Soybean	nucleus	49.84	60.08
KRH23071	Soybean	cytosol, nucleus	40.66	58.49

Protein Annotations

KEGG:00010+5.3.1.1	KEGG:00051+5.3.1.1	KEGG:00562+5.3.1.1	KEGG:00710+5.3.1.1	MapMan:1.2.4	EntrezGene:100812398
MapMan:3.12.3	Gene3D:3.20.20.70	EMBL:ACUP02008219	InterPro:Aldolase_TIM	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G146200
GO:GO:0003674	GO:GO:0003824	GO:GO:0004807	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006091	GO:GO:0006094	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0019563	GO:GO:0046166	UniProt:I1LZA5	InterPro:IPR000652	InterPro:IPR013785	EnsemblPlants:KRH19958
ProteinID:KRH19958	ProteinID:KRH19958.1	HAMAP:MF_00147_B	PFAM:PF00121	ScanProsite:PS00171	PFscan:PS51440
PANTHER:PTHR21139	PANTHER:PTHR21139:SF15	MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6142	MetaCyc:PWY-7003
SUPFAM:SSF51351	TIGRFAMs:TIGR00419	InterPro:TIM_sf	InterPro:TrioseP_Isoase_bac/euk	InterPro:Triosephosphate_isomerase	InterPro:Triosephosphate_isomerase_AS
UniParc:UPI0001CABCE8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:25915810..25921888

Molecular Weight (calculated)

32621.6 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.030

Length

305 amino acids

Sequence
(BLAST)

001: MAATSTSLFF SNLHSLNPQP FSSSLSFFRN VHSTLSFPSS SKPSRGVVAM AGSGKFFVGG NWKCNGTKDS ISKLVSDLNS ATLEPDVDVV VAPPFVYIDQ
101: VKNSITDRIE ISAQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGENDEFIG KKTAYALSEG LGVIACIGEL LQEREAGQTF DICFQQLKAF
201: ADAVPSWDNI VIAYEPVWAI GTGKVATPEQ AQEVHAAVRD WLKKNVSAKV ASKTRIIYGG SVNASNSAEL AKQEDIDGFL VGGASLKGPE FATIINSVTS
301: KKVAA

Best Arabidopsis Sequence Match ( AT2G21170.1 )
(BLAST)

001: MAATSLTAPP SFSGLRRISP KLDAAAVSSH QSFFHRVNSS TRLVSSSSSS HRSPRGVVAM AGSGKFFVGG NWKCNGTKDS IAKLISDLNS ATLEADVDVV
101: VSPPFVYIDQ VKSSLTDRID ISGQNSWVGK GGAFTGEISV EQLKDLGCKW VILGHSERRH VIGEKDEFIG KKAAYALSEG LGVIACIGEK LEEREAGKTF
201: DVCFAQLKAF ADAVPSWDNI VVAYEPVWAI GTGKVASPQQ AQEVHVAVRG WLKKNVSEEV ASKTRIIYGG SVNGGNSAEL AKEEDIDGFL VGGASLKGPE
301: FATIVNSVTS KKVAA

Arabidopsis Description

TIMTIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.