Factsheet for HORVU1Hr1G021230.8

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G000280.1
HORVU0Hr1G027080.4
HORVU1Hr1G050750.1
HORVU4Hr1G064670.6
HORVU5Hr1G005770.3
HORVU6Hr1G062870.1
HORVU7Hr1G093620.9

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39090.1	HORVU5Hr1G005770.3	AT1G06590.1	20706207
AT2G39090.1	HORVU1Hr1G050750.1	AT1G32310.1	20706207
AT2G39090.1	HORVU4Hr1G064670.6	AT1G78770.1	20706207
AT2G39090.1	HORVU7Hr1G093620.9	AT3G16320.1	20706207
AT2G39090.1	HORVU0Hr1G027080.4	AT3G48150.1	20706207
AT2G39090.1	HORVU6Hr1G062870.1	AT3G48150.1	20706207
AT2G39090.1	HORVU0Hr1G000280.1	AT4G27600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G090300.1	Wheat	cytosol	97.12	96.08
TraesCS1D01G098700.1	Wheat	cytosol	96.58	95.54
TraesCS1B01G118300.2	Wheat	cytosol	96.04	95.01
Os05t0149900-01	Rice	cytosol	89.19	88.24
Zm00001d024858_P004	Maize	cytosol	86.31	85.69
KXG21309	Sorghum	cytosol	86.49	83.19
GSMUA_Achr5P26960_001	Banana	cytosol	73.15	72.37
VIT_05s0020g01730.t01	Wine grape	cytosol	69.91	69.29
KRH21040	Soybean	nucleus	67.03	66.43
KRH11210	Soybean	cytosol	66.85	66.25
Solyc01g067490.2.1	Tomato	cytosol	65.95	65.24
CDX74867	Canola	cytosol	61.62	61.29
CDY44628	Canola	cytosol	61.44	61.11
Bra005063.1-P	Field mustard	cytosol	61.44	61.11
AT2G39090.1	Thale cress	cytosol	60.9	60.57
CDY53538	Canola	mitochondrion	14.96	54.25
CDY06464	Canola	cytosol	12.97	50.7

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.3.4.1.1.2.3	UniProt:A0A287EUY1	InterPro:DUF2225	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU1Hr1G021230	EnsemblPlants:HORVU1Hr1G021230.8	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFAM:PF09986	PFAM:PF13181	PFAM:PF14559	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR12558
PANTHER:PTHR12558:SF8	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000B464F6A	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:85356785..85366633

Molecular Weight (calculated)

62173.7 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.297

Length

555 amino acids

Sequence
(BLAST)

001: MEAARDSMAA LLDAGLFDSA QTLGCFLVSS GGASNEASMS MKAESLVLHG DALYGEKEFR RALNVYKQAM QCSKSIPRQA TSTARISVST TVRSNVTPFN
101: ENEVKSKIAI CHSALHEYRE ALQEMEGIPS KLRSLKMNLM LGKLYRISRN NRAAAICYKE CLRQCPYIFE AIAALAEMGL SSKEFSLLFS QAPTRGGKPP
201: VDFLDAQRWW NRYVEAQCCI ASHDYKGGLD IYLELMQRFP NNVHILLEIA KIEAIIGKNE EAIMNFEKAR LIDPNIMAYM DEYAILLKLK SDYTKLNKLV
301: HDMLHIDPAR PETCIALAAF WERKDERKAL TYAEKSLRVD DRHITGYIMK GNLHLSLNRP DLAVTDFRGA QELRADLRSY QGLVRAYLAL SKCKDALFTA
401: REAMKVMHQS AKALKLVGDV HAISSTGREK ARKFYESAIR LEPGFLGAAL ALADLHVAEG RNKEAVLLLE RYLRQWADDS LHVKLAQVFA ATSLLSDALS
501: HYQSALRINP HNEAAKKGLE RLEKQMKGVD PDAPEDEDEN EGDDVDGDQD DAELL

Best Arabidopsis Sequence Match ( AT2G39090.1 )
(BLAST)

001: MEVPKEQIAT LIEHGLYDSA EMLGCFLVSS PTVSAETSPQ LKAENLILLG DALFHQREHR RAIHTYKQAL HHYTRIPKQS SGISRSSLSL STRSSVNASS
101: ISAINENEVR FKIASSHFAL NETKAAIAEM ESVKTRSLEM NILMAKLHRN SGYNRGAIAF YKECLRQCPY VLEAVIGLAE LGVSAKDIIS SFTQTSNRSA
201: KVSLDQIDPT RWLQRYVEAQ CCVASHAYKG ALELFAELLQ RFPNNVHLLT ETAKVEAIIG KNDEAIMRFE KVRSIDPYTL TSMDEYAMLL QIKCDYSRLN
301: KLVHDLLSVD HTRAEVFVAL SVLWERKDAR TALSYAEKSI RVDERHIPGY IMKGNLLLQA KRPEAAAIAF RAAQNLRSDL RSYQGLVHSY LAFGKTKEAL
401: YTAREAMNAM PQSAKALKLV GDVHAFTSSG REKAKKFYES GLRLEPGYLG AVLALAELHL MEGRNGDAVS LLERYLKDYA DDSLHVKLAQ VFAATNMLQD
501: SLSHFQAALR INPQNEAAKK GLDRLEKQMK GIDPDATDEN DENDVEDVDG DTEEAELM

Arabidopsis Description

APC7AtAPC7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSZ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.