Factsheet for Os05t0149900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0656300-01
Os02t0785900-00
Os03t0236966-00
Os06t0622500-00
Os06t0679100-00
Os10t0573000-01
Os10t0575950-01
Os12t0626300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39090.1	Os12t0626300-01	AT1G06590.1	20706207
AT2G39090.1	Os10t0575950-01	AT1G32310.1	20706207
AT2G39090.1	Os03t0236966-00	AT1G78770.1	20706207
AT2G39090.1	Os06t0622500-00	AT3G16320.1	20706207
AT2G39090.1	Os02t0656300-01	AT3G48150.1	20706207
AT2G39090.1	Os06t0679100-00	AT3G48150.1	20706207
AT2G39090.1	Os02t0785900-00	AT4G21530.1	20706207
AT2G39090.1	Os10t0573000-01	AT4G27600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G090300.1	Wheat	cytosol	90.2	90.2
TraesCS1D01G098700.1	Wheat	cytosol	90.02	90.02
TraesCS1B01G118300.2	Wheat	cytosol	89.48	89.48
HORVU1Hr1G021230.8	Barley	cytosol	88.24	89.19
Zm00001d024858_P004	Maize	cytosol	88.41	88.73
KXG21309	Sorghum	cytosol	88.41	85.96
GSMUA_Achr5P26960_001	Banana	cytosol	74.33	74.33
VIT_05s0020g01730.t01	Wine grape	cytosol	69.52	69.64
KRH21040	Soybean	nucleus	68.09	68.21
KRH11210	Soybean	cytosol	67.91	68.04
Solyc01g067490.2.1	Tomato	cytosol	65.6	65.6
CDX74867	Canola	cytosol	61.85	62.19
CDY44628	Canola	cytosol	61.68	62.01
Bra005063.1-P	Field mustard	cytosol	61.68	62.01
AT2G39090.1	Thale cress	cytosol	61.5	61.83
CDY53538	Canola	mitochondrion	15.33	56.21
CDY06464	Canola	cytosol	13.37	52.82
Os05t0149800-01	Rice	nucleus	15.33	17.62

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.3.4.1.1.2.3	EntrezGene:4337822	ProteinID:AAU44035.1	EMBL:AK101105	ProteinID:BAS92292.1
ProteinID:BAS92293.1	ProteinID:EEE62345.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlantsGene:Os05g0149900	EnsemblPlants:Os05t0149900-01	PFAM:PF14559	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR12558	PANTHER:PTHR12558:SF8	UniProt:Q65XE1	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000043F446	RefSeq:XP_015640276.1	SEG:seg

Description

tetratricopeptide repeat domain containing protein, ANAPHASE-PROMOTING COMPLEX 7Tetratricopeptide-like helical domain containing protein. (Os05t0149900-01);Similar to predicted protein. (Os05t0149900-02);Similar to tetratricopeptide repeat-containing protein. (Os05t0149900-03)

Coordinates

chr5:+:2852853..2859270

Molecular Weight (calculated)

62713.1 Da

IEP (calculated)

6.912

GRAVY (calculated)

-0.362

Length

561 amino acids

Sequence
(BLAST)

001: MEAARESMAA LVDAGLYDCA QTLGCFLVSS SPASSEAGMS MKVESLVLHG DALHGEKEFR RALSAYKQAM QYSKNIPRQA TSNTRSSVTA TGRSPSPNSS
101: SLAPLNENEV KFKIALCYSA LREHREALQE MEGIPSKART LKMNLMLGKL YRISRNNRAA AVCYKECLRQ CPYVFEAITA LAEMGLSSKE FSLIFSQAPN
201: RGGKAPGDSL DAQRWWNRYV EAQCCIASHD YKGGLDIYLD LMQRFPNNVH ILLEIAKVEA IIGRNDEAIM NFEKARLIDP NIMTYMDEYA ILLKSKSDYT
301: KLNKLVHDML HIDPARPETC LALAALWERK DERKALTYAE KSLRVDDRHI TGYIMKGNLH LLLNRPDLAV TDFRGAQELR ADLRSYQGLV RAYLALSKCK
401: DALFTAREAM KVMHQSAKAL KLVGDVHAIS SSGREKARKF YESAIRLEPG FLGAALALAD LHVAEGRNKD AVLLLERYLR QWTDDSLHIK LAQVFAATNM
501: LSDALSHYQS ALRINPHNEA AKKGLERLEK QMKGVDPDAP EEDEENEADD VDGDQDDAEL L

Best Arabidopsis Sequence Match ( AT2G39090.1 )
(BLAST)

001: MEVPKEQIAT LIEHGLYDSA EMLGCFLVSS PTVSAETSPQ LKAENLILLG DALFHQREHR RAIHTYKQAL HHYTRIPKQS SGISRSSLSL STRSSVNASS
101: ISAINENEVR FKIASSHFAL NETKAAIAEM ESVKTRSLEM NILMAKLHRN SGYNRGAIAF YKECLRQCPY VLEAVIGLAE LGVSAKDIIS SFTQTSNRSA
201: KVSLDQIDPT RWLQRYVEAQ CCVASHAYKG ALELFAELLQ RFPNNVHLLT ETAKVEAIIG KNDEAIMRFE KVRSIDPYTL TSMDEYAMLL QIKCDYSRLN
301: KLVHDLLSVD HTRAEVFVAL SVLWERKDAR TALSYAEKSI RVDERHIPGY IMKGNLLLQA KRPEAAAIAF RAAQNLRSDL RSYQGLVHSY LAFGKTKEAL
401: YTAREAMNAM PQSAKALKLV GDVHAFTSSG REKAKKFYES GLRLEPGYLG AVLALAELHL MEGRNGDAVS LLERYLKDYA DDSLHVKLAQ VFAATNMLQD
501: SLSHFQAALR INPQNEAAKK GLDRLEKQMK GIDPDATDEN DENDVEDVDG DTEEAELM

Arabidopsis Description

APC7AtAPC7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSZ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.