Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g01730.t01 | Wine grape | cytosol | 77.72 | 77.86 |
| KRH21040 | Soybean | nucleus | 75.58 | 75.71 |
| KRH11210 | Soybean | cytosol | 75.22 | 75.36 |
| Solyc01g067490.2.1 | Tomato | cytosol | 75.22 | 75.22 |
| Os05t0149900-01 | Rice | cytosol | 74.33 | 74.33 |
| TraesCS1D01G098700.1 | Wheat | cytosol | 73.97 | 73.97 |
| TraesCS1A01G090300.1 | Wheat | cytosol | 73.62 | 73.62 |
| TraesCS1B01G118300.2 | Wheat | cytosol | 73.26 | 73.26 |
| HORVU1Hr1G021230.8 | Barley | cytosol | 72.37 | 73.15 |
| Zm00001d024858_P004 | Maize | cytosol | 71.12 | 71.38 |
| KXG21309 | Sorghum | cytosol | 72.01 | 70.02 |
| CDY44628 | Canola | cytosol | 68.63 | 69.0 |
| CDX74867 | Canola | cytosol | 68.63 | 69.0 |
| Bra005063.1-P | Field mustard | cytosol | 68.63 | 69.0 |
| AT2G39090.1 | Thale cress | cytosol | 68.27 | 68.64 |
| CDY53538 | Canola | mitochondrion | 15.51 | 56.86 |
| CDY06464 | Canola | cytosol | 13.9 | 54.93 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr5G26960_001 |
| EnsemblPlants:GSMUA_Achr5P26960_001 | EnsemblPlants:GSMUA_Achr5T26960_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M0T221 |
| PFAM:PF13181 | PFAM:PF14559 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR12558 | PANTHER:PTHR12558:SF8 |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0002956FB2 |
| SEG:seg | : | : | : | : | : |
Description
Anaphase-promoting complex subunit 7 [Source:GMGC_GENE;Acc:GSMUA_Achr5G26960_001]
Coordinates
chr5:-:27598861..27610350
Molecular Weight (calculated)
62866.4 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.330
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVPKDHITT LLDNGLFYSA QMLGCFLVSS VVTNSEASPY LKAENLVLQG DALFGEKEFR RALSMYKQAL QHCKIISKQT MNNSRSSFSA SSRSSSPNSM
101: NVSPVNENEV KFKITLCHCA LSENRPALVE MEGIPPKART LRMNLTLGKL YRISRHNRSA IACYKDCLRN CPYVLEAITA LAELGVSSKE VSSLFPQTPS
201: RGGRPPFDHL DPARWLHRYV EAQCCIASSD YKGGLDHLSE LLQQFPNNVH ILLEIAKVEA IIGRHDEAIM NFEKVRSIDP FIVTYMDEYA MLLKLKSDIS
301: KLNKLVHDLL NIDPTRAEVF VALSALWERK DERRALSYAE KSLRIDDRHI SGHIMKGNLY LSLNRPDAAV TAFRGAQELR PDLRSYQGLV RSYLALSKTK
401: EALFIAREAM KLMPQSAKAL KLVGDVHASS SSGREKARKF YESALRLEPG FLGAALALAE LHVVEGRHKD AVSLLERYVK DWADDSLHIK LAQVFAATNM
501: LSEALSHYQA ALRINPQNEA AKKGLERLEK QMKGMDPDAP DEEEENEADD AEGDQEEGEL L
101: NVSPVNENEV KFKITLCHCA LSENRPALVE MEGIPPKART LRMNLTLGKL YRISRHNRSA IACYKDCLRN CPYVLEAITA LAELGVSSKE VSSLFPQTPS
201: RGGRPPFDHL DPARWLHRYV EAQCCIASSD YKGGLDHLSE LLQQFPNNVH ILLEIAKVEA IIGRHDEAIM NFEKVRSIDP FIVTYMDEYA MLLKLKSDIS
301: KLNKLVHDLL NIDPTRAEVF VALSALWERK DERRALSYAE KSLRIDDRHI SGHIMKGNLY LSLNRPDAAV TAFRGAQELR PDLRSYQGLV RSYLALSKTK
401: EALFIAREAM KLMPQSAKAL KLVGDVHASS SSGREKARKF YESALRLEPG FLGAALALAE LHVVEGRHKD AVSLLERYVK DWADDSLHIK LAQVFAATNM
501: LSEALSHYQA ALRINPQNEA AKKGLERLEK QMKGMDPDAP DEEEENEADD AEGDQEEGEL L
001: MEVPKEQIAT LIEHGLYDSA EMLGCFLVSS PTVSAETSPQ LKAENLILLG DALFHQREHR RAIHTYKQAL HHYTRIPKQS SGISRSSLSL STRSSVNASS
101: ISAINENEVR FKIASSHFAL NETKAAIAEM ESVKTRSLEM NILMAKLHRN SGYNRGAIAF YKECLRQCPY VLEAVIGLAE LGVSAKDIIS SFTQTSNRSA
201: KVSLDQIDPT RWLQRYVEAQ CCVASHAYKG ALELFAELLQ RFPNNVHLLT ETAKVEAIIG KNDEAIMRFE KVRSIDPYTL TSMDEYAMLL QIKCDYSRLN
301: KLVHDLLSVD HTRAEVFVAL SVLWERKDAR TALSYAEKSI RVDERHIPGY IMKGNLLLQA KRPEAAAIAF RAAQNLRSDL RSYQGLVHSY LAFGKTKEAL
401: YTAREAMNAM PQSAKALKLV GDVHAFTSSG REKAKKFYES GLRLEPGYLG AVLALAELHL MEGRNGDAVS LLERYLKDYA DDSLHVKLAQ VFAATNMLQD
501: SLSHFQAALR INPQNEAAKK GLDRLEKQMK GIDPDATDEN DENDVEDVDG DTEEAELM
101: ISAINENEVR FKIASSHFAL NETKAAIAEM ESVKTRSLEM NILMAKLHRN SGYNRGAIAF YKECLRQCPY VLEAVIGLAE LGVSAKDIIS SFTQTSNRSA
201: KVSLDQIDPT RWLQRYVEAQ CCVASHAYKG ALELFAELLQ RFPNNVHLLT ETAKVEAIIG KNDEAIMRFE KVRSIDPYTL TSMDEYAMLL QIKCDYSRLN
301: KLVHDLLSVD HTRAEVFVAL SVLWERKDAR TALSYAEKSI RVDERHIPGY IMKGNLLLQA KRPEAAAIAF RAAQNLRSDL RSYQGLVHSY LAFGKTKEAL
401: YTAREAMNAM PQSAKALKLV GDVHAFTSSG REKAKKFYES GLRLEPGYLG AVLALAELHL MEGRNGDAVS LLERYLKDYA DDSLHVKLAQ VFAATNMLQD
501: SLSHFQAALR INPQNEAAKK GLDRLEKQMK GIDPDATDEN DENDVEDVDG DTEEAELM
Arabidopsis Description
APC7AtAPC7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSZ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.